cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/foresight_clarity_targets_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_foresight_clarity_targets_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:160000001, elapsed 0.0s, est remaining 0.6s, peak mem 99MB, user 0.5s, sys 0.1s, output queue size 8
progress 10% @chr2:74000001, elapsed 0.1s, est remaining 0.5s, peak mem 99MB, user 1.2s, sys 0.2s, output queue size 17
progress 15% @chr2:234000001, elapsed 0.1s, est remaining 0.5s, peak mem 99MB, user 1.9s, sys 0.2s, output queue size 10
progress 20% @chr3:156000001, elapsed 0.1s, est remaining 0.4s, peak mem 99MB, user 2.7s, sys 0.3s, output queue size 14
progress 25% @chr4:114000001, elapsed 0.1s, est remaining 0.4s, peak mem 99MB, user 3.4s, sys 0.4s, output queue size 3
progress 30% @chr5:86000001, elapsed 0.2s, est remaining 0.4s, peak mem 99MB, user 4.1s, sys 0.4s, output queue size 11
progress 35% @chr6:57000001, elapsed 0.2s, est remaining 0.4s, peak mem 99MB, user 4.9s, sys 0.5s, output queue size 8
progress 40% @chr7:49000001, elapsed 0.2s, est remaining 0.3s, peak mem 99MB, user 5.5s, sys 0.7s, output queue size 6
progress 45% @chr8:51000001, elapsed 0.2s, est remaining 0.3s, peak mem 99MB, user 6.2s, sys 0.8s, output queue size 6
progress 50% @chr9:100000001, elapsed 0.3s, est remaining 0.3s, peak mem 99MB, user 7.0s, sys 0.9s, output queue size 6
progress 55% @chr10:86000001, elapsed 0.3s, est remaining 0.3s, peak mem 99MB, user 7.4s, sys 1.7s, output queue size 9
progress 60% @chr11:118000001, elapsed 0.4s, est remaining 0.2s, peak mem 99MB, user 8.1s, sys 2.2s, output queue size 20
progress 65% @chr13:13000001, elapsed 0.4s, est remaining 0.2s, peak mem 99MB, user 8.6s, sys 3.0s, output queue size 7
progress 70% @chr14:56000001, elapsed 0.4s, est remaining 0.2s, peak mem 99MB, user 8.8s, sys 4.0s, output queue size 18
progress 75% @chr16:3000001, elapsed 0.5s, est remaining 0.2s, peak mem 99MB, user 9.2s, sys 4.8s, output queue size 12
progress 80% @chr18:25000001, elapsed 0.5s, est remaining 0.1s, peak mem 99MB, user 9.6s, sys 5.5s, output queue size 21
progress 85% @chr20:47000001, elapsed 0.6s, est remaining 0.1s, peak mem 99MB, user 10.0s, sys 6.6s, output queue size 33
progress 90% @chrX:31000001, elapsed 0.6s, est remaining 0.1s, peak mem 126MB, user 10.5s, sys 7.3s, output queue size 114
progress 95% @chrY:31000001, elapsed 0.6s, est remaining 0.0s, peak mem 138MB, user 10.9s, sys 7.9s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.9s, est remaining 0.0s, peak mem 153MB, user 12.0s, sys 8.2s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813899
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.288 user 4.276 sys 5.383 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.005 user 0.001 sys 0.897 real
idle: 78 calls 0.015 user 0.007 sys 37.518 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 160485376 mem 12.676 user 8.491 sys 2.029 real