File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/57/7be7c41816c7966626b917e9f0058c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7n0gcrdu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:20:56,627 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:20:57,503 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:20:57,677 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:20:58,642 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:20:58,812 - cnv_pipe.batch.run_model - INFO - Processing cluster 490 with 170 probes
2026-06-08 22:20:59,180 - cnv_pipe.batch.run_model.cluster490 - INFO - Child process started for cluster 490 with 170 probes
2026-06-08 22:21:51,342 - cnv_pipe.batch.run_model.cluster490 - INFO - Child process finished cluster 490. Wrote cluster_490_samples.csv and cluster_490_params.csv
2026-06-08 22:21:51,343 - cnv_pipe.batch.run_model - INFO - Cluster 490 finished in 52.53 seconds. Status: SUCCESS