Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/a1e86e1ed31238db4f2327efbd13fc/negative_somatic_control_1.snv_indel.phased.vep.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/99/7fff78a91d1c83e864878d7b1d7a09/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/99/7fff78a91d1c83e864878d7b1d7a09/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/hotspots/hotspot_definitions.tsv
==> STAGING COMPLETE (4 inputs)

Loaded 73 hotspot definitions
Processed 144 variants, labeled 0 as HOTSPOT