mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-o9bjnv_m because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:20:44,078 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:20:44,943 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:20:45,112 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:20:46,021 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:20:46,179 - cnv_pipe.batch.run_model - INFO - Processing cluster 487 with 183 probes
2026-06-08 22:20:46,561 - cnv_pipe.batch.run_model.cluster487 - INFO - Child process started for cluster 487 with 183 probes
2026-06-08 22:21:44,547 - cnv_pipe.batch.run_model.cluster487 - INFO - Child process finished cluster 487. Wrote cluster_487_samples.csv and cluster_487_params.csv
2026-06-08 22:21:44,549 - cnv_pipe.batch.run_model - INFO - Cluster 487 finished in 58.37 seconds. Status: SUCCESS