2f3ff974-e2af-49e2-e063-0100007f46df_basic_stats.tsv

Filename: 2f3ff974-e2af-49e2-e063-0100007f46df_basic_stats.tsv
Full Path: s3://natera-platform-sandbox/users/abshah/daq/pipe9709/20250327_LH00362_0072_A22JH7CLT4/outputs/qc/2f3ff974-e2af-49e2-e063-0100007f46df_basic_stats.tsv
Size: 1.2 KB
Workflow Run: daq-pipe9709-1
Published: Jan 09, 2026 6:56 PM

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
2f3ff974-e2af-49e2-e063-0100007f46df	783904	104412	0.133195	783904	0.0	337888	1.5e-05	0.86679	0.000432	0.999568	72	280	345	11561	0.034215	5	11556	12	679480	243.285096	135.117416	0	0.857846	0.661794	0.661794	101923800	altera_v2_targets_effective_coding_hg38.bed	92	0.157538	0.0	0.0	0.0	0.0	0.682664	1.992538	2.304412	1.73661	1.127001	0.741291	0.455925	0.599473	0.428487	0.525646	0.953446	0.293346	0.214824	0.787689	0.0	0.297571	0.0	5.7e-05	2.023395	1.0	0.0	0.0	0.0	0.0	0.0	1.0	1.0	0	0	0.0	0.0	1632930	0.5	0	0.0	0.0	1632931

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