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2f3ff974-e2a6-49e2-e063-0100007f46df_full_basic_stats.tsv
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Published
Jan 09, 2026 6:56 PM

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name reads unmapped frac_unmapped unique_reads frac_dupes pairs frac_reads_on_target frac_reads_off_target frac_pairs_on_target frac_pairs_off_target frag_size_q20 frag_size_median frag_size_q80 proper_pairs frac_proper_pairs pairs_on_target pairs_off_target reads_on_target reads_off_target frag_size_mean frag_size_std dupes n_q20 n_q25 n_q30 n_bases bed saturation_at_1000000_reads gc_0.0 gc_0.05 gc_0.1 gc_0.15 gc_0.2 gc_0.25 gc_0.3 gc_0.35 gc_0.4 gc_0.45 gc_0.5 gc_0.55 gc_0.6 gc_0.65 gc_0.7 gc_0.75 gc_0.8 gc_0.85 gc_0.9 gc_0.95 gc_1.0 min_depth mean_depth cv_depth max_depth q1_depth q5_depth q50_depth q95_depth q99_depth lt100x lt700x n_bases_gt30x n_bases_gt100x frac_bases_gt30x frac_bases_gt100x roi_size contam n_sites loglik lrt bed_base_count
2f3ff974-e2a6-49e2-e063-0100007f46df 157704 16637 0.105495 157704 0.0 70137 2.5e-05 0.89448 0.001319 0.998681 79 283 382 2275 0.032437 3 2272 4 141063 271.356923 142.685593 0 0.863528 0.672774 0.672774 21160050 altera_v2_targets_effective_coding_hg38.bed 23 0.239535 0.0 0.0 0.0 0.0 0.958141 2.138572 2.456177 1.774214 1.095019 0.706793 0.401685 0.602981 0.430811 0.512274 0.924815 0.198236 0.0 0.0 0.0 0.31938 0.0 0.000135 1.953652 1.0 0.0 0.0 0.0 0.0 0.0 1.0 1.0 0 0 0.0 0.0 1632930 0.5 0 0.0 0.0 1632931
2f3ff974-e2a6-49e2-e063-0100007f46df 157704 16637 0.105495 157704 0.0 70137 3.2e-05 0.894473 0.001319 0.998681 79 283 382 2275 0.032437 3 2272 5 141062 271.356923 142.685593 0 0.863528 0.672774 0.672774 21160050 altera_v2_targets_effective_noncoding_hg38.bed 23 1.545199 0.0 0.0 0.0 0.858444 1.272517 1.70884 1.110641 0.562555 0.81873 1.107437 0.764568 0.556399 1.387592 1.081639 0.815835 1.370076 0.112671 0.0 0.0 0.0 0.0 0.00014 1.94353 1.0 0.0 0.0 0.0 0.0 0.0 1.0 1.0 0 0 0.0 0.0 3305132 0.5 0 0.0 0.0 3307258
2f3ff974-e2a6-49e2-e063-0100007f46df 157704 16637 0.105495 157704 0.0 70137 0.000457 0.894048 0.018901 0.981099 79 283 382 2275 0.032437 43 2232 72 140995 271.356923 142.685593 0 0.863528 0.672774 0.672774 21160050 xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v2.bed 23 0.201788 0.0 2.724143 0.0 1.059389 1.203328 1.568899 1.586972 1.482183 1.258945 0.991135 0.739723 0.644719 0.514522 0.518704 0.733182 0.591913 0.0 0.0 0.0 1.300123 0.0 8.2e-05 1.394133 3.0 0.0 0.0 0.0 0.0 0.0 1.0 1.0 0 0 0.0 0.0 32326490 0.5 0 0.0 0.0 32521855
2f3ff974-e2a6-49e2-e063-0100007f46df 157704 16637 0.105495 157704 0.0 70137 2.5e-05 0.89448 0.001319 0.998681 79 283 382 2275 0.032437 3 2272 4 141063 271.356923 142.685593 0 0.863528 0.672774 0.672774 21160050 altera_v2_targets_coding_hg38.bed 23 0.238748 0.0 0.0 0.0 0.0 0.954991 2.114623 2.451598 1.769135 1.090335 0.723121 0.400064 0.601903 0.428341 0.51228 0.946464 0.204641 0.0 0.0 0.0 0.306961 0.0 0.000135 1.954415 1.0 0.0 0.0 0.0 0.0 0.0 1.0 1.0 0 0 0.0 0.0 1634351 0.5 0 0.0 0.0 1634355
2f3ff974-e2a6-49e2-e063-0100007f46df 157704 16637 0.105495 157704 0.0 70137 3.2e-05 0.894473 0.001319 0.998681 79 283 382 2275 0.032437 3 2272 5 141062 271.356923 142.685593 0 0.863528 0.672774 0.672774 21160050 altera_v2_targets_noncoding_hg38.bed 23 1.541641 0.0 0.0 0.0 0.974022 1.0142 1.377285 1.214056 0.799941 0.870572 1.132832 0.588957 0.657342 1.507616 0.874147 1.127889 1.397587 0.114196 0.0 0.0 0.089505 0.0 0.00012 2.018672 1.0 0.0 0.0 0.0 0.0 0.0 1.0 1.0 0 0 0.0 0.0 3864954 0.5 0 0.0 0.0 3868304
2f3ff974-e2a6-49e2-e063-0100007f46df 157704 16637 0.105495 157704 0.0 70137 3.2e-05 0.894473 0.001319 0.998681 79 283 382 2275 0.032437 3 2272 5 141062 271.356923 142.685593 0 0.863528 0.672774 0.672774 21160050 altera_v2_probes_noncoding_postQC_hg38.bed 23 0.0 0.0 0.0 0.877684 0.780461 0.891345 1.067354 1.019677 0.774271 1.004042 0.953786 1.440642 1.079039 1.030645 0.859719 1.206723 0.98008 1.013826 1.645657 0.0 0.0 0.0 0.000135 1.911256 1.0 0.0 0.0 0.0 0.0 0.0 1.0 1.0 0 0 0.0 0.0 3420162 0.5 0 0.0 0.0 3425160
2f3ff974-e2a6-49e2-e063-0100007f46df 157704 16637 0.105495 157704 0.0 70137 2.5e-05 0.89448 0.001319 0.998681 79 283 382 2275 0.032437 3 2272 4 141063 271.356923 142.685593 0 0.863528 0.672774 0.672774 21160050 altera_v2_probes_coding_postQC_hg38.bed 23 0.0 0.0 0.0 0.0 1.641182 2.091268 2.099477 1.666663 1.277743 0.857027 0.78261 0.630442 0.807118 0.696422 0.63189 0.476788 0.379813 0.426974 0.0 0.0 0.0 0.0 0.000105 1.929231 1.0 0.0 0.0 0.0 0.0 0.0 1.0 1.0 0 0 0.0 0.0 2284498 0.5 0 0.0 0.0 2300280
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