26e895e5-86cb-2a63-e063-0100007f6df4_basic_stats.tsv

Filename: 26e895e5-86cb-2a63-e063-0100007f6df4_basic_stats.tsv
Full Path: s3://natera-platform-sandbox/users/abshah/daq/pipe9709/20250327_LH00362_0072_A22JH7CLT4/outputs/qc/26e895e5-86cb-2a63-e063-0100007f6df4_basic_stats.tsv
Size: 1.4 KB
Workflow Run: daq-pipe9709-1
Published: Jan 09, 2026 8:32 PM

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
26e895e5-86cb-2a63-e063-0100007f6df4	2282773184	2548159	0.001116	2282773184	0.0	1139187352	0.0011	0.997784	0.001692	0.998308	211	334	498	1105762078	0.970659	1870916	1103891162	2510296	2277714729	358.014071	135.821854	0	0.96957	0.923515	0.923515	342033753750	altera_v2_targets_effective_coding_hg38.bed	996666	0.487995	0.0	0.0	0.242999	0.41231	0.982002	1.173006	1.105089	1.133046	1.124052	1.004496	0.916331	0.945664	0.756517	0.728269	0.986422	0.983412	0.283141	0.357092	0.0	0.513757	1.0	93.273455	0.249635	602.0	12.0	35.0	96.0	135.0	160.0	0.554279	1.0	1572759	727832	0.963152	0.445721	1632930	0.4252	4913	-87844.9871	107804.9598	1632931

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