0195bb5e-7186-7869-96e9-d7c90f0ec74f_basic_stats.tsv

Filename: 0195bb5e-7186-7869-96e9-d7c90f0ec74f_basic_stats.tsv
Full Path: s3://natera-platform-sandbox/users/abshah/daq/pipe9709/20250327_LH00362_0072_A22JH7CLT4/outputs/qc/0195bb5e-7186-7869-96e9-d7c90f0ec74f_basic_stats.tsv
Size: 1.4 KB
Workflow Run: daq-pipe9709-1
Published: Jan 09, 2026 8:36 PM

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
0195bb5e-7186-7869-96e9-d7c90f0ec74f	2369240558	3397586	0.001434	2369240558	0.0	1181877767	0.000985	0.997581	0.001427	0.998573	201	290	407	1144806592	0.968634	1634104	1143172488	2333663	2363509309	308.408514	102.013939	0	0.972953	0.932297	0.932297	354876445800	altera_v2_targets_effective_coding_hg38.bed	996492	0.433958	0.0	0.0	0.46903	0.516144	0.678964	1.390753	1.487693	1.300196	1.076585	0.97751	0.809676	0.804633	0.648229	0.678809	1.020304	0.970591	0.782346	1.888245	0.0	0.559997	0.0	87.170603	0.230616	867.0	32.0	43.0	88.0	124.0	140.0	0.686413	0.999479	1622892	512065	0.993853	0.313587	1632930	0.0008	6839	-2591.7557	7.7903	1632931

2 rows