0195c48b-57e7-7a68-b66a-317a3e9dc16d_basic_stats.tsv

Filename: 0195c48b-57e7-7a68-b66a-317a3e9dc16d_basic_stats.tsv
Full Path: s3://natera-platform-sandbox/users/abshah/daq/pipe9709/20250327_LH00362_0072_A22JH7CLT4/outputs/qc/0195c48b-57e7-7a68-b66a-317a3e9dc16d_basic_stats.tsv
Size: 1.4 KB
Workflow Run: daq-pipe9709-rs-2
Published: Jan 10, 2026 6:50 PM

name	reads	unmapped	frac_unmapped	unique_reads	frac_dupes	pairs	frac_reads_on_target	frac_reads_off_target	frac_pairs_on_target	frac_pairs_off_target	frag_size_q20	frag_size_median	frag_size_q80	proper_pairs	frac_proper_pairs	pairs_on_target	pairs_off_target	reads_on_target	reads_off_target	frag_size_mean	frag_size_std	dupes	n_q20	n_q25	n_q30	n_bases	bed	saturation_at_1000000_reads	gc_0.0	gc_0.05	gc_0.1	gc_0.15	gc_0.2	gc_0.25	gc_0.3	gc_0.35	gc_0.4	gc_0.45	gc_0.5	gc_0.55	gc_0.6	gc_0.65	gc_0.7	gc_0.75	gc_0.8	gc_0.85	gc_0.9	gc_0.95	gc_1.0	min_depth	mean_depth	cv_depth	max_depth	q1_depth	q5_depth	q50_depth	q95_depth	q99_depth	lt100x	lt700x	n_bases_gt30x	n_bases_gt100x	frac_bases_gt30x	frac_bases_gt100x	roi_size	contam	n_sites	loglik	lrt	bed_base_count
0195c48b-57e7-7a68-b66a-317a3e9dc16d	3025796492	47270572	0.015623	3025796492	0.0	1487097647	0.000643	0.983735	0.001042	0.998958	138	248	346	1183267286	0.795689	1232954	1182034332	1945160	2976580760	252.246653	96.304283	0	0.968404	0.924014	0.924014	446778888000	altera_v2_targets_effective_coding_hg38.bed	963665	0.697776	0.0	0.0	0.507593	1.468909	0.924666	1.093431	1.081492	1.084325	0.968002	0.977489	0.98135	1.026724	0.920968	0.877856	1.052107	0.810116	0.752431	1.321774	0.0	0.610581	0.0	68.017529	0.29074	388.0	23.0	33.0	64.0	116.0	148.0	0.892158	1.0	1585187	176099	0.970762	0.107842	1632930	0.0745	6691	-20790.2276	9314.9324	1632931

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