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Resume
To resume this run, resubmit with same or fixed code. You can also change other parameters but that will affect caching behavior.
-resume daq_rna_8bp_4th_A23LGCTLT4_af3b8f4e_20260309-150002
Error Report
Error executing process > 'DAQ:BCLCONVERT (A23LGCTLT4;L005)'
Caused by:
Process `DAQ:BCLCONVERT (A23LGCTLT4;L005)` terminated with an error exit status (1)
Command executed:
bcl-convert \
\
--tiles s_5 \
--output-directory output \
--bcl-input-directory 20260226_LH00995_0014_A23LGCTLT4 \
--sample-sheet cgp_rna_exp0045_samplesheet_8bp_BM.csv
cat <<-END_VERSIONS > versions.yml
"DAQ:BCLCONVERT":
bclconvert: $(bcl-convert -V 2>&1 | head -n 1 | sed 's/^.*Version //')
END_VERSIONS
Command exit status:
1
Command output:
Sample sheet being processed by common lib? Yes
SampleSheet Settings:
FastqCompressionFormat = gzip
NoLaneSplitting = FALSE
OverrideCycles = Y151;I8N2;I8N2;Y151
SoftwareVersion = 4.3.6
Command error:
ERROR: Sample Sheet Error: SampleSheet.csv sample #1 (index 'CTGATCGTGG') has an index of length 10 bases, but a length of 8 was expected based upon RunInfo.xml or the OverrideCycles setting.
Work dir:
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/7ad26012829116a7c8cff0303817b8
Container:
292967571998.dkr.ecr.us-west-2.amazonaws.com/daq/bclconvert:4.4.6
Tip: you can replicate the issue by changing to the process work dir and entering the command `bash .command.run`
Workflow
- Language / Cluster
- Nextflow / pltf-dev
- Session ID
- a8cf32d7-0a3a-4acb-ba6f-faf8fb777134
- Source
- /code/main.nf
- Work Dir
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work
- Submitted By
- anaik (daq_rna_8bp_4th_A23LGCTLT4_af3b8f4e_20260309-150002)
- Resumed
- No
Cost and Runtime
- Status
- failed
- Cost
- $38.07
- Outputs
- 11 MB
- Started
- Mar 09, 2026 3:03 PM
- Completed
- Mar 09, 2026 3:58 PM
- Duration
- 54m 40s
- Post-workflow Transfer
- 2s
- Exit Status
- 1
- Peak Tasks / CPU / Mem
- 8 / 504 / 3.8 TB