Detecting adapter sequence for read1...
>Illumina TruSeq Adapter Read 1
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA
Detecting adapter sequence for read2...
>Illumina TruSeq Adapter Read 2
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
Read1 before filtering:
total reads: 3096639
total bases: 467592489
Q20 bases: 400582891(85.6692%)
Q30 bases: 303709431(64.9517%)
Read2 before filtering:
total reads: 3096639
total bases: 467592489
Q20 bases: 426509245(91.2139%)
Q30 bases: 317456958(67.8918%)
Read1 after filtering:
total reads: 502222
total bases: 22015428
Q20 bases: 21310264(96.797%)
Q30 bases: 19943553(90.589%)
Read2 after filtering:
total reads: 502222
total bases: 23207295
Q20 bases: 22575920(97.2794%)
Q30 bases: 21274689(91.6724%)
Filtering result:
reads passed filter: 1004444
reads failed due to low quality: 447376
reads failed due to too many N: 48
reads failed due to too short: 4741410
reads with adapter trimmed: 3579332
bases trimmed due to adapters: 204273937
Duplication rate: 48.7938%
Insert size peak (evaluated by paired-end reads): 36
JSON report: NTC_0001_0001_23KMKGLT4_1.fastp.json
HTML report: NTC_0001_0001_23KMKGLT4_1.fastp.html
fastp --in1 NTC_0001_0001_23KMKGLT4_1_1.fastq.gz --in2 NTC_0001_0001_23KMKGLT4_1_2.fastq.gz --out1 NTC_0001_0001_23KMKGLT4_1_1.fastp.fastq.gz --out2 NTC_0001_0001_23KMKGLT4_1_2.fastp.fastq.gz --json NTC_0001_0001_23KMKGLT4_1.fastp.json --html NTC_0001_0001_23KMKGLT4_1.fastp.html --thread 12 --detect_adapter_for_pe --reads_to_process 300000000
fastp v0.23.4, time used: 6 seconds