FastQCFastQC Report
Sat 16 May 2026
tih_rna_sample_00156_23KMKGLT4_1_trimmed_2.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenametih_rna_sample_00156_23KMKGLT4_1_trimmed_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25494091
Total Bases2.8 Gbp
Sequences flagged as poor quality0
Sequence length15-151
%GC59

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG906390.35552944405823295No Hit
CCGAGTTGTAATTTGAAGAAGGCGACTTTGTAGCTGGTCCTTGTCTATGT390420.1531413691117679No Hit
ATTTGAAGAAGGCGACTTTGTAGCTGGTCCTTGTCTATGTTCCTTGGAAC375300.14721058303275059No Hit
TTTGAAGAAGGCGACTTTGTAGCTGGTCCTTGTCTATGTTCCTTGGAACA343770.13484301126876813No Hit
GGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTCGACGT320110.1255624293488244No Hit
GGGGAAGCTCCGTTTCAAAGGCCTAATTTTCTAGGCCACCATCGAAAGGG312580.1226088037420122No Hit
CGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTCGACG309660.12146344029288984No Hit
CTTTTCTTCTTAACAGCTTATCACCCCGGAATTGGTTTATCCGGAGAGGG297970.1168780640188348No Hit
GGACGTCATAGAGGGTGAGAATCCCGTGTGGCGAGGATCCCAGTTATTTG297170.11656426581359577No Hit
GCGGCAAAAGCTCAAATTTGAAATCTGGCGTCTTCGACGTCCGAGTTGTA271940.1066678549158705No Hit
CGAGGATCCCAGTTATTTGTAAAGTGCTTTCGACGAGTCGAGTTGTTTGG271580.10652664572351296No Hit
GCCTTAGTAACGGCGAGTGAAGCGGCAAAAGCTCAAATTTGAAATCTGGC266100.10437712801762573No Hit
GTTCCACGTCAACAGCAGTTGGACGTGGGTTAGTCGATCCTAAGAGATGG262970.1031493925396281No Hit
GGTTTATCCGGAGAGGGGGTCTTATGGCTGGAAGAGCCCAGCCCTTGTGC258800.10151371939481978No Hit
GCCTAATTTTCTAGGCCACCATCGAAAGGGAATCCGGTTAATATTCCGGA258230.10129013817358698No Hit
GCCAGCGAGTACAACCTTGGCCGAGAGGTCTGGGTAATCTTGTGAAACTC256700.10068999910606735No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)