#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
FGFR3--TACC3	704	2	704.00	1.99	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	26	1808	26.19	0.39	GT	1.8892	AG	1.7819	2.5408	627	0
FGFR3--TACC3	10	1	10.00	0.01	FGFR3^ENSG00000068078.20	9836	chr4:1806892:+	TACC3^ENSG00000013810.20	27633	chr4:1739745:+	INCL_NON_REF_SPLICE	YES	60	2114	0.20	0.01	GT	1.9656	GT	1.8892	0.036	612	0
TMPRSS2--ERG	480	0	480.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	28751	chr21:38584945:-	ONLY_REF_SPLICE	YES	0	12	481.00	37.00	GT	1.6895	AG	1.9219	1.7275	1104	0
TPM3--NTRK1	188	1	188.00	1.00	TPM3^ENSG00000143549.21	13389	chr1:154170400:-	NTRK1^ENSG00000198400.13	42070	chr1:156874571:+	ONLY_REF_SPLICE	YES	5224	1	0.04	95.00	GT	1.9329	AG	1.6895	0.6802	355	0
FGFR3--BAIAP2L1	170	1	170.00	1.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	BAIAP2L1^ENSG00000006453.14	16927	chr7:98362432:-	ONLY_REF_SPLICE	YES	26	31	6.37	5.38	GT	1.8892	AG	1.8062	0.6154	1171	0
STX16--NPEPL1	168	1	168.00	0.94	STX16^ENSG00000124222.22	8855	chr20:58673711:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	914	115	0.19	1.47	GT	1.7968	AG	1.8256	0.608	1940	0
STX16--NPEPL1	10	1	10.00	0.06	STX16^ENSG00000124222.22	7774	chr20:58671297:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	927	115	0.01	0.10	GT	1.8062	AG	1.8256	0.0362	2729	0
STX16--NPEPL1	1	0	1.00	0.00	STX16^ENSG00000124222.22	1835	chr20:58652087:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	1411	115	0.00	0.02	GT	1.9899	AG	1.8256	0.0036	1258	0
LMNA--NTRK1	166	0	166.00	0.00	LMNA^ENSG00000160789.23	17733	chr1:156130773:+	NTRK1^ENSG00000198400.13	40289	chr1:156874906:+	ONLY_REF_SPLICE	YES	1176	31	0.14	5.22	GT	1.7465	AG	1.5058	0.5974	947	0
NCOA4--RET	152	1	152.00	1.00	NCOA4^ENSG00000266412.6	9075	chr10:46012883:-	RET^ENSG00000165731.20	30127	chr10:43116584:+	ONLY_REF_SPLICE	YES	1382	39	0.11	3.85	GT	1.9086	AG	1.8323	0.5506	5144	0
CCDC6--RET	117	0	117.00	0.00	CCDC6^ENSG00000108091.11	1435	chr10:59906122:-	RET^ENSG00000165731.20	31587	chr10:43116584:+	ONLY_REF_SPLICE	YES	1288	39	0.09	2.95	GT	1.8892	AG	1.8323	0.4211	2092	0
SLC34A2--ROS1	113	6	113.00	6.00	SLC34A2^ENSG00000157765.13	6084	chr4:25664330:+	ROS1^ENSG00000047936.11	58025	chr6:117324415:-	ONLY_REF_SPLICE	YES	0	5	120.00	20.00	GT	1.8892	AG	1.7465	0.4283	999	0
ETV6--NTRK3	112	0	112.00	0.00	ETV6^ENSG00000139083.11	11237	chr12:11869969:+	NTRK3^ENSG00000140538.16	46238	chr15:87940753:-	ONLY_REF_SPLICE	YES	1498	0	0.08	113.00	GT	1.7819	AG	1.9656	0.4031	1252	0
KIF5B--RET	94	1	94.00	1.00	KIF5B^ENSG00000170759.11	19977	chr10:32017143:-	RET^ENSG00000165731.20	38832	chr10:43114480:+	ONLY_REF_SPLICE	YES	859	3	0.11	24.00	GT	1.9656	AG	1.9656	0.3419	3178	0
EGFR--SEPTIN14	87	1	87.00	1.00	EGFR^ENSG00000146648.19	30734	chr7:55200413:+	SEPTIN14^ENSG00000154997.9	54769	chr7:55796092:-	ONLY_REF_SPLICE	YES	1	26	44.50	3.30	GT	1.8892	AG	1.9899	0.3167	658	0
CD74--ROS1	82	1	82.00	0.94	CD74^ENSG00000019582.16	4990	chr5:150404680:-	ROS1^ENSG00000047936.11	48731	chr6:117324415:-	ONLY_REF_SPLICE	YES	16569	5	0.01	14.00	GT	1.7819	AG	1.7465	0.2985	2407	0
CD74--ROS1	5	1	5.00	0.06	CD74^ENSG00000019582.16	4989	chr5:150404681:-	ROS1^ENSG00000047936.11	12651	chr6:117425921:-	INCL_NON_REF_SPLICE	NO	18044	0	0.00	7.00	GG	1.7819	TT	1.9656	0.0182	3299	0
TLK2--AC240565.1	73	0	73.00	0.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	AC240565.1^ENSG00000280136.2	41242	chr17:106864:-	ONLY_REF_SPLICE	YES	432	40	0.17	1.80	GT	1.8892	AG	1.8892	0.2627	1734	0
SLC45A3--BRAF	71	0	71.00	0.00	SLC45A3^ENSG00000158715.6	1116	chr1:205680394:-	BRAF^ENSG00000157764.14	25172	chr7:140794467:-	ONLY_REF_SPLICE	YES	0	1013	72.00	0.07	GT	1.5628	AG	1.7465	0.2555	2599	0
PAX8--PPARG	57	0	57.00	0.00	PAX8^ENSG00000125618.18	9714	chr2:113235394:-	PPARG^ENSG00000132170.23	31404	chr3:12379704:+	ONLY_REF_SPLICE	YES	41	6	1.38	8.29	GT	1.8295	AG	1.9329	0.2051	1923	0
TFG--NTRK1	54	0	54.00	0.00	TFG^ENSG00000114354.15	9135	chr3:100732672:+	NTRK1^ENSG00000198400.13	37655	chr1:156874571:+	ONLY_REF_SPLICE	YES	980	1	0.06	27.50	GT	1.9329	AG	1.6895	0.1943	883	0
BX571818.1--TMEM200A	23	0	23.00	0.00	BX571818.1^ENSG00000285417.1	5765	chr1:206053265:+	TMEM200A^ENSG00000164484.12	19910	chr6:130440407:+	ONLY_REF_SPLICE	YES	188	86	0.13	0.28	GT	1.9656	AG	1.7465	0.0828	1493	0