#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
FGFR3--TACC3	2321	3	2321.00	3.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	30	2298	75.00	1.01	GT	1.8892	AG	1.7819	7.891	627	0
TMPRSS2--ERG	1755	0	1755.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	28751	chr21:38584945:-	ONLY_REF_SPLICE	YES	4	31	351.20	54.88	GT	1.6895	AG	1.9219	5.959	1104	0
FGFR3--BAIAP2L1	730	2	730.00	2.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	BAIAP2L1^ENSG00000006453.14	16927	chr7:98362432:-	ONLY_REF_SPLICE	YES	33	28	21.56	25.28	GT	1.8892	AG	1.8062	2.4855	1171	0
LMNA--NTRK1	612	2	612.00	2.00	LMNA^ENSG00000160789.23	17733	chr1:156130773:+	NTRK1^ENSG00000198400.13	40289	chr1:156874906:+	ONLY_REF_SPLICE	YES	2541	133	0.24	4.59	GT	1.7465	AG	1.5058	2.0848	947	0
LMNA--NTRK1	7	0	7.00	0.00	LMNA^ENSG00000160789.23	17725	chr1:156130765:+	NTRK1^ENSG00000198400.13	40284	chr1:156874901:+	INCL_NON_REF_SPLICE	YES	2619	92	0.00	0.09	TG	1.7968	CC	1.8892	0.0238	938	0
ETV6--NTRK3	580	3	580.00	3.00	ETV6^ENSG00000139083.11	11237	chr12:11869969:+	NTRK3^ENSG00000140538.16	46238	chr15:87940753:-	ONLY_REF_SPLICE	YES	1986	11	0.29	48.67	GT	1.7819	AG	1.9656	1.9795	1252	0
TPM3--NTRK1	552	1	552.00	1.00	TPM3^ENSG00000143549.21	13389	chr1:154170400:-	NTRK1^ENSG00000198400.13	42070	chr1:156874571:+	ONLY_REF_SPLICE	YES	5672	13	0.10	39.57	GT	1.9329	AG	1.6895	1.8777	355	0
TPM3--NTRK1	6	0	6.00	0.00	TPM3^ENSG00000143549.21	11750	chr1:154172039:-	NTRK1^ENSG00000198400.13	42100	chr1:156874601:+	INCL_NON_REF_SPLICE	YES	6687	58	0.00	0.12	TG	1.7819	GG	1.2310	0.0204	69	1
NCOA4--RET	543	0	543.00	0.00	NCOA4^ENSG00000266412.6	9075	chr10:46012883:-	RET^ENSG00000165731.20	30127	chr10:43116584:+	ONLY_REF_SPLICE	YES	2007	161	0.27	3.36	GT	1.9086	AG	1.8323	1.8437	5144	0
SLC34A2--ROS1	398	4	398.00	3.97	SLC34A2^ENSG00000157765.13	6084	chr4:25664330:+	ROS1^ENSG00000047936.11	58025	chr6:117324415:-	ONLY_REF_SPLICE	YES	0	23	403.00	16.79	GT	1.8892	AG	1.7465	1.3649	999	0
SLC34A2--ROS1	4	3	4.00	0.03	SLC34A2^ENSG00000157765.13	6088	chr4:25664334:+	ROS1^ENSG00000047936.11	58028	chr6:117324412:-	INCL_NON_REF_SPLICE	YES	0	29	8.00	0.27	GA	1.7465	TG	1.8892	0.0137	1002	0
CCDC6--RET	388	1	388.00	1.00	CCDC6^ENSG00000108091.11	1435	chr10:59906122:-	RET^ENSG00000165731.20	31587	chr10:43116584:+	ONLY_REF_SPLICE	YES	1542	161	0.25	2.41	GT	1.8892	AG	1.8323	1.3208	2092	0
EML4--ALK	339	0	339.00	0.00	EML4^ENSG00000143924.19	17400	chr2:42295516:+	ALK^ENSG00000171094.18	59003	chr2:29223528:-	ONLY_REF_SPLICE	YES	445	40	0.76	8.29	GT	1.6895	AG	1.9086	1.1511	1550	0
KIF5B--RET	309	1	309.00	1.00	KIF5B^ENSG00000170759.11	19977	chr10:32017143:-	RET^ENSG00000165731.20	38832	chr10:43114480:+	ONLY_REF_SPLICE	YES	1012	6	0.31	44.43	GT	1.9656	AG	1.9656	1.0526	3178	0
CD74--ROS1	288	5	288.00	4.88	CD74^ENSG00000019582.16	4990	chr5:150404680:-	ROS1^ENSG00000047936.11	48731	chr6:117324415:-	ONLY_REF_SPLICE	YES	18826	23	0.02	12.25	GT	1.7819	AG	1.7465	0.9945	2407	0
CD74--ROS1	4	5	4.00	0.07	CD74^ENSG00000019582.16	4989	chr5:150404681:-	ROS1^ENSG00000047936.11	12651	chr6:117425921:-	INCL_NON_REF_SPLICE	NO	20402	0	0.00	10.00	GG	1.7819	TT	1.9656	0.0138	3299	0
CD74--ROS1	3	5	3.00	0.05	CD74^ENSG00000019582.16	4987	chr5:150404683:-	ROS1^ENSG00000047936.11	48729	chr6:117324417:-	INCL_NON_REF_SPLICE	YES	20559	1	0.00	4.50	AA	1.8295	TT	1.5301	0.0104	2405	0
EGFR--SEPTIN14	239	1	239.00	1.00	EGFR^ENSG00000146648.19	30734	chr7:55200413:+	SEPTIN14^ENSG00000154997.9	54769	chr7:55796092:-	ONLY_REF_SPLICE	YES	6	28	34.43	8.31	GT	1.8892	AG	1.9899	0.8149	658	0
TFG--NTRK1	203	1	203.00	1.00	TFG^ENSG00000114354.15	9135	chr3:100732672:+	NTRK1^ENSG00000198400.13	37655	chr1:156874571:+	ONLY_REF_SPLICE	YES	1283	13	0.16	14.64	GT	1.9329	AG	1.6895	0.6927	883	0
PAX8--PPARG	196	0	196.00	0.00	PAX8^ENSG00000125618.18	9714	chr2:113235394:-	PPARG^ENSG00000132170.23	31404	chr3:12379704:+	ONLY_REF_SPLICE	YES	68	8	2.86	21.89	GT	1.8295	AG	1.9329	0.6655	1923	0
STX16--NPEPL1	182	0	182.00	0.00	STX16^ENSG00000124222.22	8855	chr20:58673711:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	918	163	0.20	1.12	GT	1.7968	AG	1.8256	0.618	1940	0
STX16--NPEPL1	4	0	4.00	0.00	STX16^ENSG00000124222.22	7774	chr20:58671297:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	1028	163	0.00	0.03	GT	1.8062	AG	1.8256	0.0136	2729	0
STX16--NPEPL1	1	0	1.00	0.00	STX16^ENSG00000124222.22	8855	chr20:58673711:+	NPEPL1^ENSG00000215440.12	19290	chr20:58693737:+	ONLY_REF_SPLICE	YES	918	919	0.00	0.00	GT	1.7968	AG	1.7819	0.0034	1248	0
STX16--NPEPL1	1	0	1.00	0.00	STX16^ENSG00000124222.22	7080	chr20:58670603:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	1199	163	0.00	0.01	GT	1.9086	AG	1.8256	0.0034	2386	0
SLC45A3--BRAF	145	0	145.00	0.00	SLC45A3^ENSG00000158715.6	1116	chr1:205680394:-	BRAF^ENSG00000157764.14	25172	chr7:140794467:-	ONLY_REF_SPLICE	YES	2	1154	48.67	0.13	GT	1.5628	AG	1.7465	0.4923	2599	0
AL391056.1--ATAD5	16	0	16.00	0.00	AL391056.1^ENSG00000227619.3	5982	chr9:129582768:+	ATAD5^ENSG00000176208.9	15120	chr17:30837206:+	ONLY_REF_SPLICE	YES	1	228	8.50	0.07	GT	1.9329	AG	1.8295	0.0543	1935	0