File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_35.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_35.FusionInspector.fusions.abridged.tsv
- Size
- 3.8 KB
- Workflow Run
- dev_rna_exp0001R_2cae617
- Published
- May 16, 2026 6:34 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 2111 | 1 | 2111.00 | 0.99 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 31 | 1235 | 66.03 | 1.71 | GT | 1.8892 | AG | 1.7819 | 7.2494 | 627 | 0 |
| FGFR3--TACC3 | 13 | 1 | 13.00 | 0.01 | FGFR3^ENSG00000068078.20 | 9880 | chr4:1806936:+ | TACC3^ENSG00000013810.20 | 27593 | chr4:1739705:+ | INCL_NON_REF_SPLICE | YES | 18 | 1252 | 0.79 | 0.01 | GA | 1.8892 | TA | 1.5219 | 0.0446 | 623 | 0 |
| TMPRSS2--ERG | 1680 | 0 | 1680.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 3 | 31 | 420.25 | 52.53 | GT | 1.6895 | AG | 1.9219 | 5.7666 | 1104 | 0 |
| TPM3--NTRK1 | 551 | 1 | 551.00 | 1.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3849 | 11 | 0.14 | 46.08 | GT | 1.9329 | AG | 1.6895 | 1.8947 | 355 | 0 |
| ETV6--NTRK3 | 497 | 1 | 497.00 | 1.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1133 | 4 | 0.44 | 99.80 | GT | 1.7819 | AG | 1.9656 | 1.7093 | 1252 | 0 |
| CCDC6--RET | 476 | 0 | 476.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 924 | 77 | 0.52 | 6.12 | GT | 1.8892 | AG | 1.8323 | 1.6339 | 2092 | 0 |
| LMNA--NTRK1 | 472 | 1 | 472.00 | 1.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1406 | 86 | 0.34 | 5.45 | GT | 1.7465 | AG | 1.5058 | 1.6235 | 947 | 0 |
| EML4--ALK | 419 | 0 | 419.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 260 | 29 | 1.61 | 14.00 | GT | 1.6895 | AG | 1.9086 | 1.4382 | 1550 | 0 |
| FGFR3--BAIAP2L1 | 418 | 1 | 418.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 31 | 27 | 13.12 | 15.00 | GT | 1.8892 | AG | 1.8062 | 1.4382 | 1171 | 0 |
| NCOA4--RET | 408 | 0 | 408.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1086 | 77 | 0.38 | 5.24 | GT | 1.9086 | AG | 1.8323 | 1.4005 | 5144 | 0 |
| SLC34A2--ROS1 | 291 | 1 | 291.00 | 1.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 16 | 293.00 | 17.24 | GT | 1.8892 | AG | 1.7465 | 1.0023 | 999 | 0 |
| TFG--NTRK1 | 245 | 0 | 245.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 706 | 11 | 0.35 | 20.50 | GT | 1.9329 | AG | 1.6895 | 0.841 | 883 | 0 |
| KIF5B--RET | 232 | 1 | 232.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 577 | 3 | 0.40 | 58.50 | GT | 1.9656 | AG | 1.9656 | 0.7997 | 3178 | 0 |
| CD74--ROS1 | 180 | 2 | 180.00 | 2.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 14261 | 16 | 0.01 | 10.76 | GT | 1.7819 | AG | 1.7465 | 0.6247 | 2407 | 0 |
| EGFR--SEPTIN14 | 133 | 0 | 133.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 2 | 22 | 44.67 | 5.83 | GT | 1.8892 | AG | 1.9899 | 0.4565 | 658 | 0 |
| SLC45A3--BRAF | 109 | 0 | 109.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 1 | 616 | 55.00 | 0.18 | GT | 1.5628 | AG | 1.7465 | 0.3741 | 2599 | 0 |
| PAX8--PPARG | 106 | 0 | 106.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 35 | 9 | 2.97 | 10.70 | GT | 1.8295 | AG | 1.9329 | 0.3638 | 1923 | 0 |
| TLK2--AC240565.1 | 60 | 0 | 60.00 | 0.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 308 | 31 | 0.20 | 1.91 | GT | 1.8892 | AG | 1.8892 | 0.2059 | 1734 | 0 |
19 rows