#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
FGFR3--TACC3	1195	2	1195.00	2.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	41	1970	28.52	0.61	GT	1.8892	AG	1.7819	4.0663	627	0
TMPRSS2--ERG	795	0	795.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	28751	chr21:38584945:-	ONLY_REF_SPLICE	YES	0	25	796.00	30.62	GT	1.6895	AG	1.9219	2.7007	1104	0
LMNA--NTRK1	508	1	508.00	1.00	LMNA^ENSG00000160789.23	17733	chr1:156130773:+	NTRK1^ENSG00000198400.13	40289	chr1:156874906:+	ONLY_REF_SPLICE	YES	1585	65	0.32	7.73	GT	1.7465	AG	1.5058	1.7291	947	0
FGFR3--BAIAP2L1	372	0	372.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	BAIAP2L1^ENSG00000006453.14	16927	chr7:98362432:-	ONLY_REF_SPLICE	YES	43	28	8.48	12.86	GT	1.8892	AG	1.8062	1.2637	1171	0
TPM3--NTRK1	347	0	347.00	0.00	TPM3^ENSG00000143549.21	13389	chr1:154170400:-	NTRK1^ENSG00000198400.13	42070	chr1:156874571:+	ONLY_REF_SPLICE	YES	5768	6	0.06	49.71	GT	1.9329	AG	1.6895	1.1788	355	0
ETV6--NTRK3	321	2	321.00	2.00	ETV6^ENSG00000139083.11	11237	chr12:11869969:+	NTRK3^ENSG00000140538.16	46238	chr15:87940753:-	ONLY_REF_SPLICE	YES	1711	2	0.19	108.00	GT	1.7819	AG	1.9656	1.0973	1252	0
NCOA4--RET	278	3	278.00	3.00	NCOA4^ENSG00000266412.6	9075	chr10:46012883:-	RET^ENSG00000165731.20	30127	chr10:43116584:+	ONLY_REF_SPLICE	YES	1629	78	0.17	3.57	GT	1.9086	AG	1.8323	0.9546	5144	0
CCDC6--RET	258	0	258.00	0.00	CCDC6^ENSG00000108091.11	1435	chr10:59906122:-	RET^ENSG00000165731.20	31587	chr10:43116584:+	ONLY_REF_SPLICE	YES	1347	78	0.19	3.28	GT	1.8892	AG	1.8323	0.8764	2092	0
CD74--ROS1	209	3	209.00	3.00	CD74^ENSG00000019582.16	4990	chr5:150404680:-	ROS1^ENSG00000047936.11	48731	chr6:117324415:-	ONLY_REF_SPLICE	YES	17857	17	0.01	11.83	GT	1.7819	AG	1.7465	0.7202	2407	0
EML4--ALK	208	0	208.00	0.00	EML4^ENSG00000143924.19	17400	chr2:42295516:+	ALK^ENSG00000171094.18	59003	chr2:29223528:-	ONLY_REF_SPLICE	YES	413	13	0.50	14.93	GT	1.6895	AG	1.9086	0.7066	1550	0
KIF5B--RET	206	0	206.00	0.00	KIF5B^ENSG00000170759.11	19977	chr10:32017143:-	RET^ENSG00000165731.20	38832	chr10:43114480:+	ONLY_REF_SPLICE	YES	917	7	0.23	25.88	GT	1.9656	AG	1.9656	0.6998	3178	0
SLC34A2--ROS1	182	4	182.00	4.00	SLC34A2^ENSG00000157765.13	6084	chr4:25664330:+	ROS1^ENSG00000047936.11	58025	chr6:117324415:-	ONLY_REF_SPLICE	YES	0	17	187.00	10.39	GT	1.8892	AG	1.7465	0.6319	999	0
STX16--NPEPL1	165	1	165.00	1.00	STX16^ENSG00000124222.22	8855	chr20:58673711:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	918	141	0.18	1.18	GT	1.7968	AG	1.8256	0.5639	1940	0
STX16--NPEPL1	3	0	3.00	0.00	STX16^ENSG00000124222.22	1835	chr20:58652087:+	NPEPL1^ENSG00000215440.12	17277	chr20:58691724:+	ONLY_REF_SPLICE	YES	1469	141	0.00	0.03	GT	1.9899	AG	1.8256	0.0102	1258	0
TFG--NTRK1	150	0	150.00	0.00	TFG^ENSG00000114354.15	9135	chr3:100732672:+	NTRK1^ENSG00000198400.13	37655	chr1:156874571:+	ONLY_REF_SPLICE	YES	1143	6	0.13	21.57	GT	1.9329	AG	1.6895	0.5096	883	0
SLC45A3--BRAF	114	0	114.00	0.00	SLC45A3^ENSG00000158715.6	1116	chr1:205680394:-	BRAF^ENSG00000157764.14	25172	chr7:140794467:-	ONLY_REF_SPLICE	YES	0	1076	115.00	0.11	GT	1.5628	AG	1.7465	0.3873	2599	0
PAX8--PPARG	113	0	113.00	0.00	PAX8^ENSG00000125618.18	9714	chr2:113235394:-	PPARG^ENSG00000132170.23	31404	chr3:12379704:+	ONLY_REF_SPLICE	YES	25	7	4.38	14.25	GT	1.8295	AG	1.9329	0.3839	1923	0
PAX8--PPARG	4	0	4.00	0.00	PAX8^ENSG00000125618.18	9704	chr2:113235404:-	PPARG^ENSG00000132170.23	31395	chr3:12379695:+	INCL_NON_REF_SPLICE	YES	29	6	0.17	0.71	CT	1.8323	TT	1.9086	0.0136	1933	0
EGFR--SEPTIN14	106	1	106.00	1.00	EGFR^ENSG00000146648.19	30734	chr7:55200413:+	SEPTIN14^ENSG00000154997.9	54769	chr7:55796092:-	ONLY_REF_SPLICE	YES	4	24	21.60	4.32	GT	1.8892	AG	1.9899	0.3635	658	0
TLK2--AC240565.1	100	1	100.00	1.00	TLK2^ENSG00000146872.18	17137	chr17:62560126:+	AC240565.1^ENSG00000280136.2	41242	chr17:106864:-	ONLY_REF_SPLICE	YES	398	44	0.26	2.27	GT	1.8892	AG	1.8892	0.3431	1734	0