Detecting adapter sequence for read1...
>Illumina TruSeq Adapter Read 1
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA
Detecting adapter sequence for read2...
>Illumina TruSeq Adapter Read 2
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
Read1 before filtering:
total reads: 100000000
total bases: 15100000000
Q20 bases: 14888173370(98.5972%)
Q30 bases: 14392871619(95.317%)
Read2 before filtering:
total reads: 100000000
total bases: 15100000000
Q20 bases: 14757042316(97.7288%)
Q30 bases: 14100114115(93.3782%)
Read1 after filtering:
total reads: 98207970
total bases: 12732113401
Q20 bases: 12663291497(99.4595%)
Q30 bases: 12378984077(97.2265%)
Read2 after filtering:
total reads: 98207970
total bases: 12739247029
Q20 bases: 12621388524(99.0748%)
Q30 bases: 12249504017(96.1556%)
Filtering result:
reads passed filter: 196415940
reads failed due to low quality: 2816476
reads failed due to too many N: 616716
reads failed due to too short: 150868
reads with adapter trimmed: 112286402
bases trimmed due to adapters: 4235581488
Duplication rate: 15.8729%
Insert size peak (evaluated by paired-end reads): 119
JSON report: FFPE_V4_0001_RNA_0005_23KMKGLT4_11.fastp.json
HTML report: FFPE_V4_0001_RNA_0005_23KMKGLT4_11.fastp.html
fastp --in1 FFPE_V4_0001_RNA_0005_23KMKGLT4_11_1.fastq.gz --in2 FFPE_V4_0001_RNA_0005_23KMKGLT4_11_2.fastq.gz --out1 FFPE_V4_0001_RNA_0005_23KMKGLT4_11_1.fastp.fastq.gz --out2 FFPE_V4_0001_RNA_0005_23KMKGLT4_11_2.fastp.fastq.gz --json FFPE_V4_0001_RNA_0005_23KMKGLT4_11.fastp.json --html FFPE_V4_0001_RNA_0005_23KMKGLT4_11.fastp.html --thread 12 --detect_adapter_for_pe
fastp v0.23.4, time used: 221 seconds