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Filename
FFPE_V4_0001_RNA_0005_23KMKGLT4_14.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_14.FusionInspector.fusions.abridged.tsv
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5.1 KB
Workflow Run
dev_rna_exp0001R_5f1fa79
Published
Mar 09, 2026 12:00 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
FGFR3--TACC3 91 1 91.00 1.00 FGFR3^ENSG00000068078.20 9878 chr4:1806934:+ TACC3^ENSG00000013810.20 27590 chr4:1739702:+ ONLY_REF_SPLICE YES 10 931 8.45 0.10 GT 1.8892 AG 1.7819 0.9387 627 0
TMPRSS2--ERG 62 0 62.00 0.00 TMPRSS2^ENSG00000184012.14 4652 chr21:41508081:- ERG^ENSG00000157554.19 28751 chr21:38584945:- ONLY_REF_SPLICE YES 0 4 63.00 12.60 GT 1.6895 AG 1.9219 0.6326 1104 0
FGFR3--BAIAP2L1 47 0 47.00 0.00 FGFR3^ENSG00000068078.20 9878 chr4:1806934:+ BAIAP2L1^ENSG00000006453.14 16927 chr7:98362432:- ONLY_REF_SPLICE YES 10 13 4.36 3.43 GT 1.8892 AG 1.8062 0.4796 1171 0
LMNA--NTRK1 40 0 40.00 0.00 LMNA^ENSG00000160789.23 17733 chr1:156130773:+ NTRK1^ENSG00000198400.13 40289 chr1:156874906:+ ONLY_REF_SPLICE YES 510 6 0.08 5.86 GT 1.7465 AG 1.5058 0.4081 947 0
ETV6--NTRK3 37 0 37.00 0.00 ETV6^ENSG00000139083.11 11237 chr12:11869969:+ NTRK3^ENSG00000140538.16 46238 chr15:87940753:- ONLY_REF_SPLICE YES 770 0 0.05 38.00 GT 1.7819 AG 1.9656 0.3775 1252 0
NCOA4--RET 37 0 37.00 0.00 NCOA4^ENSG00000266412.6 9075 chr10:46012883:- RET^ENSG00000165731.20 30127 chr10:43116584:+ ONLY_REF_SPLICE YES 734 10 0.05 3.45 GT 1.9086 AG 1.8323 0.3775 5144 0
TPM3--NTRK1 34 0 34.00 0.00 TPM3^ENSG00000143549.21 13389 chr1:154170400:- NTRK1^ENSG00000198400.13 42070 chr1:156874571:+ ONLY_REF_SPLICE YES 3282 2 0.01 11.67 GT 1.9329 AG 1.6895 0.3469 355 0
KIF5B--RET 26 0 26.00 0.00 KIF5B^ENSG00000170759.11 19977 chr10:32017143:- RET^ENSG00000165731.20 38832 chr10:43114480:+ ONLY_REF_SPLICE YES 479 1 0.06 13.50 GT 1.9656 AG 1.9656 0.2653 3178 0
EML4--ALK 23 0 23.00 0.00 EML4^ENSG00000143924.19 17400 chr2:42295516:+ ALK^ENSG00000171094.18 59003 chr2:29223528:- ONLY_REF_SPLICE YES 228 11 0.10 2.00 GT 1.6895 AG 1.9086 0.2347 1550 0
CCDC6--RET 22 0 22.00 0.00 CCDC6^ENSG00000108091.11 1435 chr10:59906122:- RET^ENSG00000165731.20 31587 chr10:43116584:+ ONLY_REF_SPLICE YES 594 10 0.04 2.09 GT 1.8892 AG 1.8323 0.2245 2092 0
PAX8--PPARG 18 0 18.00 0.00 PAX8^ENSG00000125618.18 9714 chr2:113235394:- PPARG^ENSG00000132170.23 31404 chr3:12379704:+ ONLY_REF_SPLICE YES 17 1 1.06 9.50 GT 1.8295 AG 1.9329 0.1837 1923 0
CD74--ROS1 11 0 11.00 0.00 CD74^ENSG00000019582.16 4990 chr5:150404680:- ROS1^ENSG00000047936.11 48731 chr6:117324415:- ONLY_REF_SPLICE YES 9876 0 0.00 12.00 GT 1.7819 AG 1.7465 0.1122 2407 0
TFG--NTRK1 9 0 9.00 0.00 TFG^ENSG00000114354.15 9135 chr3:100732672:+ NTRK1^ENSG00000198400.13 37655 chr1:156874571:+ ONLY_REF_SPLICE YES 622 2 0.02 3.33 GT 1.9329 AG 1.6895 0.0918 883 0
EGFR--AC069287.1 8 0 8.00 0.00 EGFR^ENSG00000146648.19 30734 chr7:55200413:+ AC069287.1^ENSG00000254468.2 45121 chr11:121426:- ONLY_REF_SPLICE YES 0 17 9.00 0.50 GT 1.8892 AG 1.9899 0.0816 1220 0
SLC45A3--BRAF 7 0 7.00 0.00 SLC45A3^ENSG00000158715.6 1116 chr1:205680394:- BRAF^ENSG00000157764.14 25172 chr7:140794467:- ONLY_REF_SPLICE YES 0 454 8.00 0.02 GT 1.5628 AG 1.7465 0.0714 2599 0
OR2T2--OR2T27 5 0 5.00 0.00 OR2T2^ENSG00000196240.5 3499 chr1:248449392:+ OR2T27^ENSG00000187701.4 12219 chr1:248650888:- ONLY_REF_SPLICE YES 2 45 2.00 0.13 GT 1.6402 AG 1.8323 0.051 1100 0
SLC34A2--ROS1 5 0 5.00 0.00 SLC34A2^ENSG00000157765.13 6084 chr4:25664330:+ ROS1^ENSG00000047936.11 58025 chr6:117324415:- ONLY_REF_SPLICE YES 0 0 6.00 6.00 GT 1.8892 AG 1.7465 0.051 999 0
GATD3A--MXI1 4 0 4.00 0.00 GATD3A^ENSG00000160221.18 5154 chr21:44140342:+ MXI1^ENSG00000119950.21 27142 chr10:110228189:+ ONLY_REF_SPLICE YES 307 19 0.02 0.25 GT 1.7819 AG 1.9329 0.0408 1373 0
CLDN15--FIS1 3 0 3.00 0.00 CLDN15^ENSG00000106404.14 2456 chr7:101237365:- FIS1^ENSG00000214253.9 13802 chr7:101240906:- ONLY_REF_SPLICE YES 52 476 0.08 0.01 GT 1.5656 AG 1.9329 0.0306 893 0
DCUN1D4--RFC1 3 0 3.00 0.00 DCUN1D4^ENSG00000109184.15 1268 chr4:51843267:+ RFC1^ENSG00000035928.16 33828 chr4:39327756:- ONLY_REF_SPLICE YES 115 219 0.03 0.02 GT 1.8892 AG 1.7465 0.0306 5210 0
TBRG1--FOCAD 2 0 2.00 0.00 TBRG1^ENSG00000154144.13 7014 chr11:124631417:+ FOCAD^ENSG00000188352.12 19493 chr9:20717794:+ ONLY_REF_SPLICE YES 184 229 0.02 0.01 GT 1.7968 AG 1.7819 0.0204 2523 0
WAC--MINDY3 2 0 2.00 0.00 WAC^ENSG00000095787.24 12601 chr10:28596041:+ MINDY3^ENSG00000148481.14 29293 chr10:15847943:- ONLY_REF_SPLICE YES 406 115 0.01 0.03 GT 1.0530 AG 1.2729 0.0204 1063 0
METTL21A--KANSL1L 1 0 1.00 0.00 METTL21A^ENSG00000144401.14 2700 chr2:207624229:- KANSL1L^ENSG00000144445.17 19721 chr2:210154611:- ONLY_REF_SPLICE YES 227 80 0.01 0.02 GT 1.5329 AG 1.7465 0.0102 153 0
METTL21A--KANSL1L 1 0 1.00 0.00 METTL21A^ENSG00000144401.14 3812 chr2:207621806:- KANSL1L^ENSG00000144445.17 19721 chr2:210154611:- ONLY_REF_SPLICE YES 236 80 0.01 0.02 GT 1.5656 AG 1.7465 0.0102 1150 0
PARD3--PIP4K2A 1 0 1.00 0.00 PARD3^ENSG00000148498.16 1450 chr10:34814876:- PIP4K2A^ENSG00000150867.14 44422 chr10:22609717:- ONLY_REF_SPLICE YES 415 592 0.00 0.00 GT 1.8256 AG 1.9219 0.0102 3591 0
26 rows