File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_47.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_47.FusionInspector.fusions.abridged.tsv
- Size
- 3.7 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:00 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 73 | 0 | 73.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 3 | 686 | 18.50 | 0.11 | GT | 1.8892 | AG | 1.7819 | 0.746 | 627 | 0 |
| TMPRSS2--ERG | 38 | 0 | 38.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 0 | 39.00 | 39.00 | GT | 1.6895 | AG | 1.9219 | 0.3883 | 1104 | 0 |
| ETV6--NTRK3 | 27 | 0 | 27.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 643 | 0 | 0.04 | 28.00 | GT | 1.7819 | AG | 1.9656 | 0.2759 | 1252 | 0 |
| SLC34A2--ROS1 | 22 | 0 | 22.00 | 0.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 0 | 23.00 | 23.00 | GT | 1.8892 | AG | 1.7465 | 0.2248 | 999 | 0 |
| TPM3--NTRK1 | 20 | 0 | 20.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 2183 | 0 | 0.01 | 21.00 | GT | 1.9329 | AG | 1.6895 | 0.2044 | 355 | 0 |
| CCDC6--RET | 10 | 0 | 10.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 389 | 5 | 0.03 | 1.83 | GT | 1.8892 | AG | 1.8323 | 0.1022 | 2092 | 0 |
| FGFR3--BAIAP2L1 | 10 | 0 | 10.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 3 | 10 | 2.75 | 1.00 | GT | 1.8892 | AG | 1.8062 | 0.1022 | 1171 | 0 |
| NCOA4--RET | 10 | 0 | 10.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 652 | 5 | 0.02 | 1.83 | GT | 1.9086 | AG | 1.8323 | 0.1022 | 5144 | 0 |
| LMNA--NTRK1 | 8 | 0 | 8.00 | 0.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 365 | 5 | 0.02 | 1.50 | GT | 1.7465 | AG | 1.5058 | 0.0818 | 947 | 0 |
| PAX8--PPARG | 8 | 0 | 8.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 14 | 5 | 0.60 | 1.50 | GT | 1.8295 | AG | 1.9329 | 0.0818 | 1923 | 0 |
| SLC45A3--BRAF | 8 | 0 | 8.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 385 | 9.00 | 0.02 | GT | 1.5628 | AG | 1.7465 | 0.0818 | 2599 | 0 |
| UVRAG--MLEC | 6 | 0 | 6.00 | 0.00 | UVRAG^ENSG00000198382.9 | 1315 | chr11:75815524:+ | MLEC^ENSG00000110917.8 | 33848 | chr12:120694091:+ | ONLY_REF_SPLICE | YES | 958 | 344 | 0.01 | 0.02 | GT | 1.8892 | AG | 1.9656 | 0.0613 | 5217 | 0 |
| CHD7--SDCBP | 5 | 0 | 5.00 | 0.00 | CHD7^ENSG00000171316.12 | 1343 | chr8:60679082:+ | SDCBP^ENSG00000137575.12 | 51293 | chr8:58570887:+ | ONLY_REF_SPLICE | YES | 6 | 73 | 0.86 | 0.08 | GT | 1.4566 | AG | 1.8892 | 0.0511 | 2103 | 0 |
| TIMM17B--OTUD5 | 4 | 0 | 4.00 | 0.00 | TIMM17B^ENSG00000126768.12 | 2385 | chrX:48896759:- | OTUD5^ENSG00000068308.14 | 14925 | chrX:48926050:- | ONLY_REF_SPLICE | YES | 263 | 101 | 0.02 | 0.05 | GT | 1.8892 | AG | 1.9656 | 0.0409 | 1029 | 0 |
| TFG--NTRK1 | 3 | 1 | 3.00 | 1.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 360 | 0 | 0.01 | 5.00 | GT | 1.9329 | AG | 1.6895 | 0.0409 | 883 | 0 |
| ARMC8--NCK1 | 2 | 0 | 2.00 | 0.00 | ARMC8^ENSG00000114098.18 | 1352 | chr3:138187599:+ | NCK1^ENSG00000158092.7 | 33717 | chr3:136867431:+ | ONLY_REF_SPLICE | YES | 130 | 61 | 0.02 | 0.05 | GT | 1.9329 | AG | 1.9899 | 0.0204 | 2686 | 0 |
| GINS1--NKAP | 2 | 0 | 2.00 | 0.00 | GINS1^ENSG00000101003.10 | 3784 | chr20:25413854:+ | NKAP^ENSG00000101882.10 | 23635 | chrX:119932216:- | ONLY_REF_SPLICE | YES | 154 | 22 | 0.02 | 0.13 | GT | 1.9656 | AG | 1.2419 | 0.0204 | 383 | 0 |
| MRPS27--PTCD2 | 2 | 0 | 2.00 | 0.00 | MRPS27^ENSG00000113048.17 | 2725 | chr5:72314081:- | PTCD2^ENSG00000049883.15 | 30906 | chr5:72335794:+ | ONLY_REF_SPLICE | YES | 239 | 83 | 0.01 | 0.04 | GT | 1.8892 | AG | 1.8892 | 0.0204 | 82 | 1 |
19 rows