File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_28.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_28.FusionInspector.fusions.abridged.tsv
- Size
- 4.3 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:00 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 397 | 0 | 397.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 19 | 997 | 19.90 | 0.40 | GT | 1.8892 | AG | 1.7819 | 4.0448 | 627 | 0 |
| TMPRSS2--ERG | 288 | 0 | 288.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 5 | 289.00 | 48.17 | GT | 1.6895 | AG | 1.9219 | 2.9343 | 1104 | 0 |
| FGFR3--BAIAP2L1 | 153 | 0 | 153.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 19 | 13 | 7.70 | 11.00 | GT | 1.8892 | AG | 1.8062 | 1.5588 | 1171 | 0 |
| TPM3--NTRK1 | 153 | 0 | 153.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3149 | 5 | 0.05 | 25.67 | GT | 1.9329 | AG | 1.6895 | 1.5588 | 355 | 0 |
| LMNA--NTRK1 | 105 | 0 | 105.00 | 0.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 834 | 29 | 0.13 | 3.53 | GT | 1.7465 | AG | 1.5058 | 1.0698 | 947 | 0 |
| ETV6--NTRK3 | 101 | 0 | 101.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 910 | 0 | 0.11 | 102.00 | GT | 1.7819 | AG | 1.9656 | 1.029 | 1252 | 0 |
| EML4--ALK | 98 | 0 | 98.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 210 | 4 | 0.47 | 19.80 | GT | 1.6895 | AG | 1.9086 | 0.9985 | 1550 | 0 |
| KIF5B--RET | 78 | 1 | 78.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 465 | 2 | 0.17 | 26.67 | GT | 1.9656 | AG | 1.9656 | 0.8049 | 3178 | 0 |
| CCDC6--RET | 77 | 1 | 77.00 | 1.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 662 | 31 | 0.12 | 2.47 | GT | 1.8892 | AG | 1.8323 | 0.7947 | 2092 | 0 |
| NCOA4--RET | 74 | 1 | 74.00 | 1.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 886 | 31 | 0.09 | 2.38 | GT | 1.9086 | AG | 1.8323 | 0.7641 | 5144 | 0 |
| SLC34A2--ROS1 | 67 | 1 | 67.00 | 1.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 3 | 69.00 | 17.25 | GT | 1.8892 | AG | 1.7465 | 0.6928 | 999 | 0 |
| TFG--NTRK1 | 51 | 0 | 51.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 585 | 5 | 0.09 | 8.67 | GT | 1.9329 | AG | 1.6895 | 0.5196 | 883 | 0 |
| CD74--ROS1 | 35 | 0 | 35.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 9716 | 3 | 0.00 | 9.00 | GT | 1.7819 | AG | 1.7465 | 0.3566 | 2407 | 0 |
| SLC45A3--BRAF | 32 | 0 | 32.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 477 | 33.00 | 0.07 | GT | 1.5628 | AG | 1.7465 | 0.326 | 2599 | 0 |
| PAX8--PPARG | 17 | 0 | 17.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 19 | 2 | 0.90 | 6.00 | GT | 1.8295 | AG | 1.9329 | 0.1732 | 1923 | 0 |
| EGFR--AC069287.1 | 11 | 0 | 11.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | AC069287.1^ENSG00000254468.2 | 45121 | chr11:121426:- | ONLY_REF_SPLICE | YES | 3 | 19 | 3.00 | 0.60 | GT | 1.8892 | AG | 1.9899 | 0.1121 | 1220 | 0 |
| ASPH--MBP | 6 | 0 | 6.00 | 0.00 | ASPH^ENSG00000198363.18 | 8097 | chr8:61680968:- | MBP^ENSG00000197971.16 | 60076 | chr18:77105286:- | ONLY_REF_SPLICE | YES | 270 | 164 | 0.03 | 0.04 | GC | 1.8323 | AG | 1.9086 | 0.0611 | 1134 | 0 |
| DCPS--ST3GAL4 | 5 | 0 | 5.00 | 0.00 | DCPS^ENSG00000110063.10 | 9763 | chr11:126338399:+ | ST3GAL4^ENSG00000110080.20 | 27523 | chr11:126406096:+ | ONLY_REF_SPLICE | YES | 210 | 38 | 0.03 | 0.15 | GT | 1.8062 | AG | 1.6895 | 0.0509 | 129 | 0 |
| SPECC1L--EVC2 | 3 | 0 | 3.00 | 0.00 | SPECC1L^ENSG00000100014.20 | 1167 | chr22:24270983:+ | EVC2^ENSG00000173040.13 | 38061 | chr4:5665649:- | ONLY_REF_SPLICE | YES | 40 | 130 | 0.10 | 0.03 | GT | 1.7968 | AG | 1.8295 | 0.0306 | 2425 | 0 |
| KMT2A--BCCIP | 2 | 0 | 2.00 | 0.00 | KMT2A^ENSG00000118058.23 | 27923 | chr11:118494767:+ | BCCIP^ENSG00000107949.17 | 65063 | chr10:125836104:+ | ONLY_REF_SPLICE | YES | 308 | 348 | 0.01 | 0.01 | GT | 1.7232 | AG | 1.9219 | 0.0204 | 824 | 0 |
| MGMT--GARRE1 | 2 | 0 | 2.00 | 0.00 | MGMT^ENSG00000170430.10 | 2244 | chr10:129536377:+ | GARRE1^ENSG00000166398.14 | 21779 | chr19:34299679:+ | ONLY_REF_SPLICE | YES | 471 | 1 | 0.01 | 1.50 | GT | 1.9656 | AG | 1.6895 | 0.0204 | 410 | 0 |
22 rows