File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_35.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_35.FusionInspector.fusions.abridged.tsv
- Size
- 4.1 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:00 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 796 | 1 | 796.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 21 | 916 | 36.27 | 0.87 | GT | 1.8892 | AG | 1.7819 | 8.1197 | 627 | 0 |
| TMPRSS2--ERG | 550 | 0 | 550.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 1 | 17 | 275.50 | 30.61 | GT | 1.6895 | AG | 1.9219 | 5.6033 | 1104 | 0 |
| LMNA--NTRK1 | 202 | 0 | 202.00 | 0.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1139 | 50 | 0.18 | 3.98 | GT | 1.7465 | AG | 1.5058 | 2.0579 | 947 | 0 |
| TPM3--NTRK1 | 198 | 1 | 198.00 | 1.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 2944 | 7 | 0.07 | 25.00 | GT | 1.9329 | AG | 1.6895 | 2.0274 | 355 | 0 |
| ETV6--NTRK3 | 193 | 1 | 193.00 | 1.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 961 | 3 | 0.20 | 48.75 | GT | 1.7819 | AG | 1.9656 | 1.9764 | 1252 | 0 |
| CCDC6--RET | 183 | 0 | 183.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 675 | 61 | 0.27 | 2.97 | GT | 1.8892 | AG | 1.8323 | 1.8644 | 2092 | 0 |
| FGFR3--BAIAP2L1 | 176 | 1 | 176.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 21 | 19 | 8.09 | 8.90 | GT | 1.8892 | AG | 1.8062 | 1.8032 | 1171 | 0 |
| NCOA4--RET | 143 | 0 | 143.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 898 | 61 | 0.16 | 2.32 | GT | 1.9086 | AG | 1.8323 | 1.4569 | 5144 | 0 |
| EML4--ALK | 140 | 0 | 140.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 192 | 14 | 0.73 | 9.40 | GT | 1.6895 | AG | 1.9086 | 1.4263 | 1550 | 0 |
| SLC34A2--ROS1 | 127 | 1 | 127.00 | 1.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 11 | 129.00 | 10.75 | GT | 1.8892 | AG | 1.7465 | 1.304 | 999 | 0 |
| TFG--NTRK1 | 126 | 0 | 126.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 558 | 7 | 0.23 | 15.88 | GT | 1.9329 | AG | 1.6895 | 1.2837 | 883 | 0 |
| KIF5B--RET | 101 | 1 | 101.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 453 | 3 | 0.23 | 25.75 | GT | 1.9656 | AG | 1.9656 | 1.0392 | 3178 | 0 |
| CD74--ROS1 | 89 | 2 | 89.00 | 2.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 9911 | 11 | 0.01 | 7.67 | GT | 1.7819 | AG | 1.7465 | 0.9271 | 2407 | 0 |
| PAX8--PPARG | 54 | 0 | 54.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 24 | 5 | 2.20 | 9.17 | GT | 1.8295 | AG | 1.9329 | 0.5501 | 1923 | 0 |
| EGFR--AC069287.1 | 53 | 0 | 53.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | AC069287.1^ENSG00000254468.2 | 45121 | chr11:121426:- | ONLY_REF_SPLICE | YES | 2 | 24 | 18.00 | 2.16 | GT | 1.8892 | AG | 1.9899 | 0.54 | 1220 | 0 |
| SLC45A3--BRAF | 46 | 0 | 46.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 474 | 47.00 | 0.10 | GT | 1.5628 | AG | 1.7465 | 0.4686 | 2599 | 0 |
| DDX46--ATP6V1B2 | 2 | 0 | 2.00 | 0.00 | DDX46^ENSG00000145833.16 | 23098 | chr5:134817714:+ | ATP6V1B2^ENSG00000147416.11 | 40606 | chr8:20212102:+ | ONLY_REF_SPLICE | YES | 186 | 226 | 0.02 | 0.01 | GC | 1.9086 | AG | 1.8295 | 0.0204 | 2074 | 0 |
| ENO3--WDR11 | 2 | 0 | 2.00 | 0.00 | ENO3^ENSG00000108515.18 | 8513 | chr17:4955604:+ | WDR11^ENSG00000120008.16 | 14260 | chr10:120852524:+ | ONLY_REF_SPLICE | YES | 32 | 209 | 0.09 | 0.01 | GT | 1.9329 | AG | 1.7968 | 0.0204 | 1057 | 0 |
| RETREG3--TPTEP2 | 2 | 0 | 2.00 | 0.00 | RETREG3^ENSG00000141699.11 | 6210 | chr17:42592056:- | TPTEP2^ENSG00000244627.5 | 34144 | chr22:38336706:- | ONLY_REF_SPLICE | YES | 430 | 1 | 0.01 | 1.50 | GT | 1.7968 | AG | 1.6729 | 0.0204 | 3779 | 0 |
| SIDT2--WDR90 | 1 | 0 | 1.00 | 0.00 | SIDT2^ENSG00000149577.16 | 8599 | chr11:117187699:+ | WDR90^ENSG00000161996.19 | 24910 | chr16:653525:+ | ONLY_REF_SPLICE | YES | 262 | 158 | 0.01 | 0.01 | GT | 1.9899 | AG | 1.5058 | 0.0102 | 399 | 0 |
21 rows