File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_3.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_3.FusionInspector.fusions.abridged.tsv
- Size
- 4.1 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:01 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1004 | 2 | 1004.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 24 | 1587 | 40.28 | 0.63 | GT | 1.8892 | AG | 1.7819 | 10.2246 | 627 | 0 |
| FGFR3--TACC3 | 7 | 0 | 7.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9855 | chr4:1806911:+ | TACC3^ENSG00000013810.20 | 27846 | chr4:1739958:+ | INCL_NON_REF_SPLICE | YES | 108 | 1362 | 0.07 | 0.01 | TC | 1.8892 | CA | 1.8323 | 0.0711 | 439 | 0 |
| TMPRSS2--ERG | 762 | 0 | 762.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 13 | 763.00 | 54.50 | GT | 1.6895 | AG | 1.9219 | 7.7447 | 1104 | 0 |
| FGFR3--BAIAP2L1 | 344 | 2 | 344.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 25 | 26 | 13.35 | 12.85 | GT | 1.8892 | AG | 1.8062 | 3.5166 | 1171 | 0 |
| LMNA--NTRK1 | 320 | 3 | 320.00 | 3.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1585 | 74 | 0.20 | 4.32 | GT | 1.7465 | AG | 1.5058 | 3.2829 | 947 | 0 |
| ETV6--NTRK3 | 233 | 1 | 233.00 | 1.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1179 | 8 | 0.20 | 26.11 | GT | 1.7819 | AG | 1.9656 | 2.3783 | 1252 | 0 |
| NCOA4--RET | 213 | 0 | 213.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1172 | 114 | 0.18 | 1.86 | GT | 1.9086 | AG | 1.8323 | 2.1649 | 5144 | 0 |
| TPM3--NTRK1 | 212 | 1 | 212.00 | 1.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 2952 | 7 | 0.07 | 26.75 | GT | 1.9329 | AG | 1.6895 | 2.1649 | 355 | 0 |
| CCDC6--RET | 169 | 0 | 169.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 949 | 114 | 0.18 | 1.48 | GT | 1.8892 | AG | 1.8323 | 1.7177 | 2092 | 0 |
| SLC34A2--ROS1 | 141 | 2 | 141.00 | 2.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 5 | 144.00 | 24.00 | GT | 1.8892 | AG | 1.7465 | 1.4534 | 999 | 0 |
| EML4--ALK | 108 | 0 | 108.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 141 | 10 | 0.77 | 9.91 | GT | 1.6895 | AG | 1.9086 | 1.0977 | 1550 | 0 |
| CD74--ROS1 | 103 | 0 | 103.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 12803 | 5 | 0.01 | 17.33 | GT | 1.7819 | AG | 1.7465 | 1.0469 | 2407 | 0 |
| KIF5B--RET | 98 | 0 | 98.00 | 0.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 438 | 4 | 0.23 | 19.80 | GT | 1.9656 | AG | 1.9656 | 0.996 | 3178 | 0 |
| PAX8--PPARG | 79 | 0 | 79.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 36 | 5 | 2.16 | 13.33 | GT | 1.8295 | AG | 1.9329 | 0.8029 | 1923 | 0 |
| SLC45A3--BRAF | 78 | 0 | 78.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 617 | 79.00 | 0.13 | GT | 1.5628 | AG | 1.7465 | 0.7928 | 2599 | 0 |
| EGFR--SEPTIN14 | 56 | 0 | 56.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 1 | 2 | 28.50 | 19.00 | GT | 1.8892 | AG | 1.9899 | 0.5692 | 658 | 0 |
| TFG--NTRK1 | 43 | 0 | 43.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 458 | 7 | 0.10 | 5.50 | GT | 1.9329 | AG | 1.6895 | 0.437 | 883 | 0 |
| SZRD1--FNBP1 | 5 | 0 | 5.00 | 0.00 | SZRD1^ENSG00000055070.17 | 3070 | chr1:16367308:+ | FNBP1^ENSG00000187239.17 | 22311 | chr9:129929695:- | ONLY_REF_SPLICE | YES | 1157 | 655 | 0.01 | 0.01 | GT | 1.4566 | AG | 1.7819 | 0.0508 | 4962 | 0 |
| CLDN15--FIS1 | 2 | 0 | 2.00 | 0.00 | CLDN15^ENSG00000106404.14 | 2456 | chr7:101237365:- | FIS1^ENSG00000214253.9 | 13802 | chr7:101240906:- | ONLY_REF_SPLICE | YES | 113 | 683 | 0.03 | 0.00 | GT | 1.5656 | AG | 1.9329 | 0.0203 | 893 | 0 |
| ZC3H7A--SNX29 | 2 | 0 | 2.00 | 0.00 | ZC3H7A^ENSG00000122299.12 | 1135 | chr16:11797124:- | SNX29^ENSG00000048471.14 | 45512 | chr16:12126633:+ | ONLY_REF_SPLICE | YES | 151 | 753 | 0.02 | 0.00 | GT | 1.7968 | AG | 1.8892 | 0.0203 | 2344 | 0 |
21 rows