File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_26.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_26.FusionInspector.fusions.abridged.tsv
- Size
- 4.7 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:01 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1291 | 3 | 1291.00 | 3.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 25 | 1336 | 49.81 | 0.97 | GT | 1.8892 | AG | 1.7819 | 13.1932 | 627 | 0 |
| TMPRSS2--ERG | 827 | 0 | 827.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 21 | 828.00 | 37.64 | GT | 1.6895 | AG | 1.9219 | 8.4318 | 1104 | 0 |
| LMNA--NTRK1 | 356 | 4 | 356.00 | 4.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1978 | 96 | 0.18 | 3.72 | GT | 1.7465 | AG | 1.5058 | 3.6705 | 947 | 0 |
| ETV6--NTRK3 | 345 | 0 | 345.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1255 | 7 | 0.28 | 43.25 | GT | 1.7819 | AG | 1.9656 | 3.5175 | 1252 | 0 |
| TPM3--NTRK1 | 340 | 0 | 340.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3941 | 13 | 0.09 | 24.36 | GT | 1.9329 | AG | 1.6895 | 3.4665 | 355 | 0 |
| FGFR3--BAIAP2L1 | 335 | 0 | 335.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 25 | 19 | 12.92 | 16.80 | GT | 1.8892 | AG | 1.8062 | 3.4155 | 1171 | 0 |
| SLC34A2--ROS1 | 290 | 5 | 290.00 | 5.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 21 | 296.00 | 13.45 | GT | 1.8892 | AG | 1.7465 | 3.0077 | 999 | 0 |
| NCOA4--RET | 273 | 1 | 273.00 | 0.99 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1335 | 147 | 0.21 | 1.86 | GT | 1.9086 | AG | 1.8323 | 2.7935 | 5144 | 0 |
| NCOA4--RET | 3 | 1 | 3.00 | 0.01 | NCOA4^ENSG00000266412.6 | 9076 | chr10:46012882:- | RET^ENSG00000165731.20 | 30129 | chr10:43116586:+ | INCL_NON_REF_SPLICE | YES | 1332 | 161 | 0.00 | 0.03 | TC | 1.8323 | GA | 1.8323 | 0.0307 | 5142 | 0 |
| CCDC6--RET | 251 | 0 | 251.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 910 | 147 | 0.28 | 1.70 | GT | 1.8892 | AG | 1.8323 | 2.5591 | 2092 | 0 |
| KIF5B--RET | 228 | 3 | 228.00 | 2.95 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 757 | 5 | 0.31 | 38.67 | GT | 1.9656 | AG | 1.9656 | 2.3547 | 3178 | 0 |
| KIF5B--RET | 4 | 3 | 4.00 | 0.05 | KIF5B^ENSG00000170759.11 | 19970 | chr10:32017150:- | RET^ENSG00000165731.20 | 38827 | chr10:43114475:+ | INCL_NON_REF_SPLICE | YES | 779 | 1 | 0.01 | 4.00 | CA | 1.9656 | CC | 1.9656 | 0.0413 | 3187 | 0 |
| KIF5B--RET | 3 | 0 | 3.00 | 0.00 | KIF5B^ENSG00000170759.11 | 19876 | chr10:32017244:- | RET^ENSG00000165731.20 | 38956 | chr10:43114604:+ | INCL_NON_REF_SPLICE | YES | 1048 | 94 | 0.00 | 0.04 | TG | 1.3753 | CC | 1.8892 | 0.0306 | 3222 | 0 |
| CD74--ROS1 | 207 | 0 | 207.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 12678 | 21 | 0.02 | 9.45 | GT | 1.7819 | AG | 1.7465 | 2.1105 | 2407 | 0 |
| CD74--ROS1 | 4 | 0 | 4.00 | 0.00 | CD74^ENSG00000019582.16 | 4992 | chr5:150404678:- | ROS1^ENSG00000047936.11 | 48732 | chr6:117324414:- | INCL_NON_REF_SPLICE | YES | 12680 | 21 | 0.00 | 0.23 | AC | 1.9329 | GA | 1.8295 | 0.0408 | 2408 | 0 |
| EML4--ALK | 190 | 0 | 190.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 295 | 24 | 0.65 | 7.64 | GT | 1.6895 | AG | 1.9086 | 1.9372 | 1550 | 0 |
| TFG--NTRK1 | 133 | 0 | 133.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 934 | 13 | 0.14 | 9.57 | GT | 1.9329 | AG | 1.6895 | 1.356 | 883 | 0 |
| SLC45A3--BRAF | 116 | 0 | 116.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 1 | 684 | 58.50 | 0.17 | GT | 1.5628 | AG | 1.7465 | 1.1827 | 2599 | 0 |
| PAX8--PPARG | 115 | 0 | 115.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 20 | 5 | 5.52 | 19.33 | GT | 1.8295 | AG | 1.9329 | 1.1725 | 1923 | 0 |
| EGFR--SEPTIN14 | 98 | 1 | 98.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 7 | 1 | 12.50 | 50.00 | GT | 1.8892 | AG | 1.9899 | 1.0094 | 658 | 0 |
| VPS4A--AHRR | 5 | 0 | 5.00 | 0.00 | VPS4A^ENSG00000132612.16 | 1183 | chr16:69311532:+ | AHRR^ENSG00000063438.19 | 17678 | chr5:353730:+ | ONLY_REF_SPLICE | YES | 79 | 563 | 0.07 | 0.01 | GT | 1.7968 | AG | 1.5329 | 0.051 | 2894 | 0 |
| ELF2--BSCL2 | 2 | 0 | 2.00 | 0.00 | ELF2^ENSG00000109381.20 | 11008 | chr4:139084133:- | BSCL2^ENSG00000168000.15 | 36799 | chr11:62691141:- | ONLY_REF_SPLICE | YES | 237 | 282 | 0.01 | 0.01 | GT | 1.7819 | AG | 1.8295 | 0.0204 | 50 | 1 |
| EPRS1--HEATR1 | 2 | 0 | 2.00 | 0.00 | EPRS1^ENSG00000136628.18 | 1188 | chr1:220046343:- | HEATR1^ENSG00000119285.11 | 67463 | chr1:236557345:- | ONLY_REF_SPLICE | YES | 351 | 322 | 0.01 | 0.01 | GT | 1.8892 | AG | 1.9086 | 0.0204 | 2666 | 0 |
24 rows