File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_27.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_27.FusionInspector.fusions.abridged.tsv
- Size
- 4.9 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:02 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 907 | 0 | 907.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 23 | 1164 | 37.83 | 0.78 | GT | 1.8892 | AG | 1.7819 | 9.2436 | 627 | 0 |
| FGFR3--TACC3 | 7 | 0 | 7.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9882 | chr4:1806938:+ | TACC3^ENSG00000013810.20 | 27592 | chr4:1739704:+ | INCL_NON_REF_SPLICE | YES | 14 | 1175 | 0.53 | 0.01 | GT | 1.8892 | GT | 1.5058 | 0.0713 | 623 | 0 |
| TMPRSS2--ERG | 528 | 0 | 528.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 20 | 529.00 | 25.19 | GT | 1.6895 | AG | 1.9219 | 5.381 | 1104 | 0 |
| LMNA--NTRK1 | 268 | 1 | 268.00 | 1.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1319 | 67 | 0.20 | 3.97 | GT | 1.7465 | AG | 1.5058 | 2.7415 | 947 | 0 |
| FGFR3--BAIAP2L1 | 234 | 2 | 234.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 24 | 16 | 9.48 | 13.94 | GT | 1.8892 | AG | 1.8062 | 2.4052 | 1171 | 0 |
| ETV6--NTRK3 | 190 | 0 | 190.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1066 | 3 | 0.18 | 47.75 | GT | 1.7819 | AG | 1.9656 | 1.9364 | 1252 | 0 |
| TPM3--NTRK1 | 183 | 0 | 183.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3447 | 3 | 0.05 | 46.00 | GT | 1.9329 | AG | 1.6895 | 1.865 | 355 | 0 |
| CCDC6--RET | 181 | 1 | 181.00 | 1.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 821 | 79 | 0.22 | 2.29 | GT | 1.8892 | AG | 1.8323 | 1.8548 | 2092 | 0 |
| NCOA4--RET | 174 | 0 | 174.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1063 | 79 | 0.16 | 2.19 | GT | 1.9086 | AG | 1.8323 | 1.7733 | 5144 | 0 |
| KIF5B--RET | 123 | 1 | 123.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 555 | 7 | 0.22 | 15.62 | GT | 1.9656 | AG | 1.9656 | 1.2637 | 3178 | 0 |
| SLC34A2--ROS1 | 118 | 6 | 118.00 | 5.88 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 12 | 125.00 | 9.62 | GT | 1.8892 | AG | 1.7465 | 1.2625 | 999 | 0 |
| SLC34A2--ROS1 | 3 | 5 | 3.00 | 0.12 | SLC34A2^ENSG00000157765.13 | 6088 | chr4:25664334:+ | ROS1^ENSG00000047936.11 | 58028 | chr6:117324412:- | INCL_NON_REF_SPLICE | YES | 0 | 19 | 9.00 | 0.45 | GA | 1.7465 | TG | 1.8892 | 0.0318 | 1002 | 0 |
| CD74--ROS1 | 117 | 1 | 117.00 | 0.96 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 10920 | 12 | 0.01 | 9.15 | GT | 1.7819 | AG | 1.7465 | 1.2022 | 2407 | 0 |
| CD74--ROS1 | 5 | 1 | 5.00 | 0.04 | CD74^ENSG00000019582.16 | 4987 | chr5:150404683:- | ROS1^ENSG00000047936.11 | 48729 | chr6:117324417:- | INCL_NON_REF_SPLICE | NO | 11802 | 0 | 0.00 | 7.00 | AA | 1.8295 | TT | 1.5301 | 0.0514 | 2405 | 0 |
| TFG--NTRK1 | 74 | 0 | 74.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 696 | 3 | 0.11 | 18.75 | GT | 1.9329 | AG | 1.6895 | 0.7542 | 883 | 0 |
| EGFR--SEPTIN14 | 72 | 0 | 72.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 1 | 0 | 36.50 | 73.00 | GT | 1.8892 | AG | 1.9899 | 0.7338 | 658 | 0 |
| SLC45A3--BRAF | 67 | 0 | 67.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 567 | 68.00 | 0.12 | GT | 1.5628 | AG | 1.7465 | 0.6828 | 2599 | 0 |
| EML4--ALK | 57 | 0 | 57.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 246 | 17 | 0.23 | 3.22 | GT | 1.6895 | AG | 1.9086 | 0.5809 | 1550 | 0 |
| PAX8--PPARG | 46 | 0 | 46.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 44 | 1 | 1.04 | 23.50 | GT | 1.8295 | AG | 1.9329 | 0.4688 | 1923 | 0 |
| AGAP3--HOXD11 | 4 | 0 | 4.00 | 0.00 | AGAP3^ENSG00000133612.19 | 1978 | chr7:151086808:+ | HOXD11^ENSG00000128713.14 | 32027 | chr2:176107582:+ | INCL_NON_REF_SPLICE | YES | 7 | 0 | 0.62 | 5.00 | GC | 1.2310 | CC | 0.9183 | 0.0408 | 4 | 37 |
| PAFAH1B2--ESPL1 | 2 | 0 | 2.00 | 0.00 | PAFAH1B2^ENSG00000168092.14 | 1135 | chr11:117144418:+ | ESPL1^ENSG00000135476.12 | 33440 | chr12:53287972:+ | ONLY_REF_SPLICE | YES | 210 | 106 | 0.01 | 0.03 | GT | 1.8892 | AG | 1.9329 | 0.0204 | 4 | 1 |
| SPIN3--NPRL3 | 2 | 0 | 2.00 | 0.00 | SPIN3^ENSG00000204271.13 | 2105 | chrX:56994723:- | NPRL3^ENSG00000103148.17 | 32925 | chr16:117375:- | ONLY_REF_SPLICE | YES | 108 | 226 | 0.03 | 0.01 | GT | 1.9899 | AG | 1.7465 | 0.0204 | 1326 | 0 |
| TSEN2--DENND1A | 2 | 0 | 2.00 | 0.00 | TSEN2^ENSG00000154743.19 | 11427 | chr3:12505231:+ | DENND1A^ENSG00000119522.16 | 53088 | chr9:123440491:- | ONLY_REF_SPLICE | YES | 74 | 241 | 0.04 | 0.01 | GT | 1.9329 | AG | 1.9656 | 0.0204 | 323 | 0 |
| AGAP5--BMS1P4 | 1 | 0 | 1.00 | 0.00 | AGAP5^ENSG00000172650.14 | 1349 | chr10:73697533:- | BMS1P4^ENSG00000242338.6 | 22689 | chr10:73718165:- | ONLY_REF_SPLICE | YES | 219 | 26 | 0.01 | 0.07 | GT | 1.8323 | AG | 1.9899 | 0.0102 | 2175 | 0 |
25 rows