File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_25.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_25.FusionInspector.fusions.abridged.tsv
- Size
- 4.9 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:02 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1960 | 1 | 1960.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 35 | 1412 | 54.50 | 1.39 | GT | 1.8892 | AG | 1.7819 | 20.0004 | 627 | 0 |
| FGFR3--TACC3 | 4 | 1 | 4.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9872 | chr4:1806928:+ | TACC3^ENSG00000013810.20 | 27587 | chr4:1739699:+ | INCL_NON_REF_SPLICE | YES | 111 | 1384 | 0.05 | 0.00 | AC | 1.8892 | AG | 1.7819 | 0.0408 | 633 | 0 |
| FGFR3--TACC3 | 3 | 1 | 3.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9874 | chr4:1806930:+ | TACC3^ENSG00000013810.20 | 27587 | chr4:1739699:+ | INCL_NON_REF_SPLICE | YES | 93 | 1384 | 0.05 | 0.00 | CG | 1.9219 | AG | 1.7819 | 0.0306 | 632 | 0 |
| TMPRSS2--ERG | 1361 | 0 | 1361.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 47 | 1362.00 | 28.38 | GT | 1.6895 | AG | 1.9219 | 13.8809 | 1104 | 0 |
| LMNA--NTRK1 | 592 | 4 | 592.00 | 3.96 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2615 | 152 | 0.23 | 3.90 | GT | 1.7465 | AG | 1.5058 | 6.0783 | 947 | 0 |
| LMNA--NTRK1 | 7 | 3 | 7.00 | 0.04 | LMNA^ENSG00000160789.23 | 17734 | chr1:156130774:+ | NTRK1^ENSG00000198400.13 | 40292 | chr1:156874909:+ | INCL_NON_REF_SPLICE | YES | 2615 | 178 | 0.00 | 0.06 | TG | 1.7465 | TC | 1.4566 | 0.0718 | 949 | 0 |
| FGFR3--BAIAP2L1 | 580 | 0 | 580.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 38 | 24 | 14.90 | 23.24 | GT | 1.8892 | AG | 1.8062 | 5.9155 | 1171 | 0 |
| ETV6--NTRK3 | 526 | 1 | 526.00 | 0.99 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1376 | 16 | 0.38 | 31.06 | GT | 1.7819 | AG | 1.9656 | 5.3748 | 1252 | 0 |
| ETV6--NTRK3 | 4 | 1 | 4.00 | 0.01 | ETV6^ENSG00000139083.11 | 11235 | chr12:11869967:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | INCL_NON_REF_SPLICE | YES | 1427 | 16 | 0.00 | 0.35 | AG | 1.9086 | AG | 1.9656 | 0.0409 | 1252 | 0 |
| NCOA4--RET | 483 | 1 | 483.00 | 1.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1506 | 243 | 0.32 | 1.99 | GT | 1.9086 | AG | 1.8323 | 4.9364 | 5144 | 0 |
| TPM3--NTRK1 | 476 | 2 | 476.00 | 2.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3829 | 9 | 0.13 | 47.90 | GT | 1.9329 | AG | 1.6895 | 4.8752 | 355 | 0 |
| CCDC6--RET | 438 | 2 | 438.00 | 2.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 989 | 243 | 0.45 | 1.81 | GT | 1.8892 | AG | 1.8323 | 4.4876 | 2092 | 0 |
| CCDC6--RET | 3 | 0 | 3.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1337 | chr10:59906220:- | RET^ENSG00000165731.20 | 31695 | chr10:43116692:+ | INCL_NON_REF_SPLICE | YES | 1368 | 329 | 0.00 | 0.01 | AG | 1.8892 | GC | 1.8256 | 0.0306 | 2163 | 0 |
| SLC34A2--ROS1 | 323 | 0 | 323.00 | 0.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 27 | 324.00 | 11.57 | GT | 1.8892 | AG | 1.7465 | 3.2943 | 999 | 0 |
| KIF5B--RET | 307 | 4 | 307.00 | 4.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 756 | 10 | 0.41 | 28.36 | GT | 1.9656 | AG | 1.9656 | 3.1719 | 3178 | 0 |
| EML4--ALK | 277 | 0 | 277.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 295 | 26 | 0.94 | 10.30 | GT | 1.6895 | AG | 1.9086 | 2.8251 | 1550 | 0 |
| CD74--ROS1 | 266 | 1 | 266.00 | 1.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 13064 | 28 | 0.02 | 9.24 | GT | 1.7819 | AG | 1.7465 | 2.7232 | 2407 | 0 |
| PAX8--PPARG | 187 | 0 | 187.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 39 | 6 | 4.70 | 26.86 | GT | 1.8295 | AG | 1.9329 | 1.9072 | 1923 | 0 |
| TFG--NTRK1 | 173 | 0 | 173.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 919 | 9 | 0.19 | 17.40 | GT | 1.9329 | AG | 1.6895 | 1.7644 | 883 | 0 |
| EGFR--SEPTIN14 | 167 | 1 | 167.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 9 | 0 | 16.90 | 169.00 | GT | 1.8892 | AG | 1.9899 | 1.7134 | 658 | 0 |
| SLC45A3--BRAF | 150 | 0 | 150.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 638 | 151.00 | 0.24 | GT | 1.5628 | AG | 1.7465 | 1.5299 | 2599 | 0 |
| EIF4G3--RNF121 | 2 | 0 | 2.00 | 0.00 | EIF4G3^ENSG00000075151.22 | 1714 | chr1:21176175:- | RNF121^ENSG00000137522.18 | 65473 | chr11:71995450:+ | ONLY_REF_SPLICE | YES | 230 | 440 | 0.01 | 0.01 | GT | 1.7465 | AG | 1.9086 | 0.0204 | 1290 | 0 |
| FNBP4--ABCF2 | 2 | 0 | 2.00 | 0.00 | FNBP4^ENSG00000109920.13 | 13582 | chr11:47731374:- | ABCF2^ENSG00000033050.9 | 34332 | chr7:151216029:- | ONLY_REF_SPLICE | YES | 237 | 361 | 0.01 | 0.01 | GT | 1.9086 | AG | 1.7819 | 0.0204 | 1097 | 0 |
| VRK2--ATP11B | 1 | 0 | 1.00 | 0.00 | VRK2^ENSG00000028116.18 | 21870 | chr2:58146474:+ | ATP11B^ENSG00000058063.16 | 37519 | chr3:182848476:+ | ONLY_REF_SPLICE | YES | 534 | 349 | 0.00 | 0.01 | GT | 1.8892 | AG | 1.9086 | 0.0102 | 1644 | 0 |
25 rows