File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_10.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_10.FusionInspector.fusions.abridged.tsv
- Size
- 4.0 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:03 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1606 | 2 | 1606.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 34 | 1706 | 45.97 | 0.94 | GT | 1.8892 | AG | 1.7819 | 16.3729 | 627 | 0 |
| TMPRSS2--ERG | 982 | 0 | 982.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 41 | 983.00 | 23.40 | GT | 1.6895 | AG | 1.9219 | 9.9989 | 1104 | 0 |
| LMNA--NTRK1 | 501 | 3 | 501.00 | 3.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2319 | 123 | 0.22 | 4.07 | GT | 1.7465 | AG | 1.5058 | 5.1318 | 947 | 0 |
| FGFR3--BAIAP2L1 | 453 | 3 | 453.00 | 3.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 34 | 24 | 13.06 | 18.28 | GT | 1.8892 | AG | 1.8062 | 4.643 | 1171 | 0 |
| ETV6--NTRK3 | 414 | 1 | 414.00 | 1.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1656 | 6 | 0.25 | 59.43 | GT | 1.7819 | AG | 1.9656 | 4.2256 | 1252 | 0 |
| TPM3--NTRK1 | 383 | 2 | 383.00 | 2.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 4369 | 10 | 0.09 | 35.09 | GT | 1.9329 | AG | 1.6895 | 3.9202 | 355 | 0 |
| NCOA4--RET | 355 | 1 | 355.00 | 1.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1569 | 227 | 0.23 | 1.57 | GT | 1.9086 | AG | 1.8323 | 3.6249 | 5144 | 0 |
| CCDC6--RET | 321 | 0 | 321.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1159 | 227 | 0.28 | 1.41 | GT | 1.8892 | AG | 1.8323 | 3.2685 | 2092 | 0 |
| KIF5B--RET | 291 | 3 | 291.00 | 3.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 906 | 7 | 0.33 | 36.88 | GT | 1.9656 | AG | 1.9656 | 2.9935 | 3178 | 0 |
| SLC34A2--ROS1 | 283 | 3 | 283.00 | 3.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 20 | 287.00 | 13.67 | GT | 1.8892 | AG | 1.7465 | 2.9121 | 999 | 0 |
| SLC34A2--ROS1 | 4 | 0 | 4.00 | 0.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 59163 | chr6:117321340:- | INCL_NON_REF_SPLICE | YES | 0 | 339 | 5.00 | 0.01 | GT | 1.8892 | GC | 1.7232 | 0.0407 | 2137 | 0 |
| CD74--ROS1 | 232 | 1 | 232.00 | 1.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 13146 | 20 | 0.02 | 11.14 | GT | 1.7819 | AG | 1.7465 | 2.3725 | 2407 | 0 |
| CD74--ROS1 | 3 | 0 | 3.00 | 0.00 | CD74^ENSG00000019582.16 | 4968 | chr5:150404702:- | ROS1^ENSG00000047936.11 | 48801 | chr6:117324345:- | INCL_NON_REF_SPLICE | YES | 15007 | 151 | 0.00 | 0.03 | CC | 1.9656 | AT | 1.8892 | 0.0305 | 2355 | 0 |
| EML4--ALK | 175 | 0 | 175.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 402 | 21 | 0.44 | 8.00 | GT | 1.6895 | AG | 1.9086 | 1.7819 | 1550 | 0 |
| TFG--NTRK1 | 146 | 0 | 146.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 1091 | 10 | 0.13 | 13.36 | GT | 1.9329 | AG | 1.6895 | 1.4866 | 883 | 0 |
| PAX8--PPARG | 139 | 0 | 139.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 51 | 7 | 2.69 | 17.50 | GT | 1.8295 | AG | 1.9329 | 1.4153 | 1923 | 0 |
| EGFR--SEPTIN14 | 123 | 1 | 123.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 4 | 3 | 25.00 | 31.25 | GT | 1.8892 | AG | 1.9899 | 1.2626 | 658 | 0 |
| SLC45A3--BRAF | 107 | 0 | 107.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 845 | 108.00 | 0.13 | GT | 1.5628 | AG | 1.7465 | 1.0895 | 2599 | 0 |
| EYA3--PUM1 | 2 | 0 | 2.00 | 0.00 | EYA3^ENSG00000158161.16 | 8767 | chr1:28017154:- | PUM1^ENSG00000134644.16 | 53758 | chr1:30942123:- | ONLY_REF_SPLICE | YES | 324 | 297 | 0.01 | 0.01 | GT | 1.8323 | AG | 1.7968 | 0.0204 | 2291 | 0 |
20 rows