File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_33.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_33.FusionInspector.fusions.abridged.tsv
- Size
- 4.9 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:03 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 2030 | 5 | 2030.00 | 5.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 43 | 1231 | 46.27 | 1.65 | GT | 1.8892 | AG | 1.7819 | 20.7337 | 627 | 0 |
| FGFR3--TACC3 | 3 | 3 | 3.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9872 | chr4:1806928:+ | TACC3^ENSG00000013810.20 | 27587 | chr4:1739699:+ | INCL_NON_REF_SPLICE | YES | 97 | 1210 | 0.07 | 0.01 | AC | 1.8892 | AG | 1.7819 | 0.0306 | 633 | 0 |
| TMPRSS2--ERG | 1554 | 0 | 1554.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 30 | 1555.00 | 50.16 | GT | 1.6895 | AG | 1.9219 | 15.833 | 1104 | 0 |
| FGFR3--BAIAP2L1 | 572 | 1 | 572.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 45 | 24 | 12.48 | 22.96 | GT | 1.8892 | AG | 1.8062 | 5.8381 | 1171 | 0 |
| LMNA--NTRK1 | 503 | 5 | 503.00 | 5.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2533 | 131 | 0.20 | 3.86 | GT | 1.7465 | AG | 1.5058 | 5.1758 | 947 | 0 |
| ETV6--NTRK3 | 493 | 0 | 493.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1386 | 9 | 0.36 | 49.40 | GT | 1.7819 | AG | 1.9656 | 5.023 | 1252 | 0 |
| TPM3--NTRK1 | 460 | 1 | 460.00 | 1.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3898 | 19 | 0.12 | 23.10 | GT | 1.9329 | AG | 1.6895 | 4.6969 | 355 | 0 |
| NCOA4--RET | 411 | 1 | 411.00 | 1.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1520 | 213 | 0.27 | 1.93 | GT | 1.9086 | AG | 1.8323 | 4.1977 | 5144 | 0 |
| CCDC6--RET | 396 | 2 | 396.00 | 2.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1017 | 213 | 0.39 | 1.86 | GT | 1.8892 | AG | 1.8323 | 4.0551 | 2092 | 0 |
| KIF5B--RET | 345 | 1 | 345.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 722 | 7 | 0.48 | 43.38 | GT | 1.9656 | AG | 1.9656 | 3.5253 | 3178 | 0 |
| SLC34A2--ROS1 | 314 | 6 | 314.00 | 6.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 24 | 321.00 | 12.84 | GT | 1.8892 | AG | 1.7465 | 3.2603 | 999 | 0 |
| CD74--ROS1 | 295 | 0 | 295.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 12819 | 24 | 0.02 | 11.84 | GT | 1.7819 | AG | 1.7465 | 3.0056 | 2407 | 0 |
| EML4--ALK | 275 | 0 | 275.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 306 | 16 | 0.90 | 16.24 | GT | 1.6895 | AG | 1.9086 | 2.8019 | 1550 | 0 |
| EGFR--SEPTIN14 | 178 | 3 | 178.00 | 3.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 5 | 4 | 30.33 | 36.40 | GT | 1.8892 | AG | 1.9899 | 1.8442 | 658 | 0 |
| PAX8--PPARG | 172 | 0 | 172.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 51 | 13 | 3.33 | 12.36 | GT | 1.8295 | AG | 1.9329 | 1.7524 | 1923 | 0 |
| TFG--NTRK1 | 169 | 0 | 169.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 945 | 19 | 0.18 | 8.50 | GT | 1.9329 | AG | 1.6895 | 1.7219 | 883 | 0 |
| SLC45A3--BRAF | 165 | 0 | 165.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 661 | 166.00 | 0.25 | GT | 1.5628 | AG | 1.7465 | 1.6811 | 2599 | 0 |
| ZNF512--CTCF | 6 | 0 | 6.00 | 0.00 | ZNF512^ENSG00000243943.10 | 1174 | chr2:27583142:+ | CTCF^ENSG00000102974.16 | 21612 | chr16:67571148:+ | ONLY_REF_SPLICE | YES | 180 | 21 | 0.04 | 0.32 | GT | 1.7819 | AG | 1.9656 | 0.0611 | 259 | 0 |
| CACNB4--PAPOLA | 3 | 0 | 3.00 | 0.00 | CACNB4^ENSG00000182389.20 | 25862 | chr2:151869177:- | PAPOLA^ENSG00000090060.18 | 81293 | chr14:96564955:+ | ONLY_REF_SPLICE | YES | 234 | 622 | 0.02 | 0.01 | GT | 1.7465 | AG | 1.6402 | 0.0306 | 378 | 0 |
| OR2T2--OR2T27 | 3 | 0 | 3.00 | 0.00 | OR2T2^ENSG00000196240.5 | 3499 | chr1:248449392:+ | OR2T27^ENSG00000187701.4 | 12219 | chr1:248650888:- | ONLY_REF_SPLICE | YES | 3 | 31 | 1.00 | 0.12 | GT | 1.6402 | AG | 1.8323 | 0.0306 | 1100 | 0 |
| CEPT1--CAPZA1 | 2 | 0 | 2.00 | 0.00 | CEPT1^ENSG00000134255.14 | 7375 | chr1:111161296:+ | CAPZA1^ENSG00000116489.13 | 24667 | chr1:112653598:+ | ONLY_REF_SPLICE | YES | 663 | 559 | 0.00 | 0.01 | GT | 1.8062 | AG | 1.9656 | 0.0204 | 1106 | 0 |
| KHDC4--SGF29 | 2 | 0 | 2.00 | 0.00 | KHDC4^ENSG00000132680.11 | 12848 | chr1:155915873:- | SGF29^ENSG00000176476.9 | 23248 | chr16:28589100:+ | ONLY_REF_SPLICE | YES | 223 | 74 | 0.01 | 0.04 | GT | 1.9086 | AG | 1.9656 | 0.0204 | 1009 | 0 |
| ZNF264--UBE3A | 2 | 0 | 2.00 | 0.00 | ZNF264^ENSG00000083844.10 | 2574 | chr19:57194001:+ | UBE3A^ENSG00000114062.22 | 34499 | chr15:25375763:- | ONLY_REF_SPLICE | YES | 290 | 474 | 0.01 | 0.01 | GT | 1.5656 | AG | 1.8062 | 0.0204 | 1276 | 0 |
| PPP1CB--HIP1R | 1 | 0 | 1.00 | 0.00 | PPP1CB^ENSG00000213639.10 | 1537 | chr2:28752176:+ | HIP1R^ENSG00000130787.14 | 19171 | chr12:122848031:+ | ONLY_REF_SPLICE | YES | 1650 | 51 | 0.00 | 0.04 | GT | 1.6895 | AG | 1.8892 | 0.0102 | 2070 | 0 |
25 rows