File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_43.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_43.FusionInspector.fusions.abridged.tsv
- Size
- 4.7 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:03 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| TMPRSS2--ERG | 618 | 0 | 618.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 10 | 619.00 | 56.27 | GT | 1.6895 | AG | 1.9219 | 6.2982 | 1104 | 0 |
| FGFR3--TACC3 | 551 | 0 | 551.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 9 | 733 | 55.20 | 0.75 | GT | 1.8892 | AG | 1.7819 | 5.6154 | 627 | 0 |
| NCOA4--RET | 219 | 0 | 219.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 797 | 51 | 0.28 | 4.23 | GT | 1.9086 | AG | 1.8323 | 2.2319 | 5144 | 0 |
| ETV6--NTRK3 | 211 | 0 | 211.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 753 | 1 | 0.28 | 106.00 | GT | 1.7819 | AG | 1.9656 | 2.1503 | 1252 | 0 |
| TPM3--NTRK1 | 207 | 0 | 207.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 2487 | 7 | 0.08 | 26.00 | GT | 1.9329 | AG | 1.6895 | 2.1096 | 355 | 0 |
| LMNA--NTRK1 | 199 | 0 | 199.00 | 0.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 945 | 47 | 0.21 | 4.17 | GT | 1.7465 | AG | 1.5058 | 2.028 | 947 | 0 |
| FGFR3--BAIAP2L1 | 198 | 0 | 198.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 10 | 4 | 18.09 | 39.80 | GT | 1.8892 | AG | 1.8062 | 2.0179 | 1171 | 0 |
| FGFR3--BAIAP2L1 | 3 | 0 | 3.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9858 | chr4:1806914:+ | BAIAP2L1^ENSG00000006453.14 | 16931 | chr7:98362428:- | INCL_NON_REF_SPLICE | YES | 45 | 4 | 0.09 | 0.80 | TT | 1.8892 | TG | 1.9086 | 0.0306 | 1162 | 0 |
| EML4--ALK | 145 | 0 | 145.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 172 | 9 | 0.84 | 14.60 | GT | 1.6895 | AG | 1.9086 | 1.4777 | 1550 | 0 |
| CCDC6--RET | 133 | 0 | 133.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 454 | 51 | 0.29 | 2.58 | GT | 1.8892 | AG | 1.8323 | 1.3554 | 2092 | 0 |
| CD74--ROS1 | 127 | 1 | 127.00 | 0.98 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 8667 | 8 | 0.01 | 14.33 | GT | 1.7819 | AG | 1.7465 | 1.3043 | 2407 | 0 |
| CD74--ROS1 | 3 | 1 | 3.00 | 0.02 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 12652 | chr6:117425920:- | INCL_NON_REF_SPLICE | NO | 8667 | 0 | 0.00 | 5.00 | GT | 1.7819 | TT | 1.9656 | 0.0308 | 3298 | 0 |
| KIF5B--RET | 127 | 1 | 127.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 365 | 2 | 0.35 | 43.00 | GT | 1.9656 | AG | 1.9656 | 1.3045 | 3178 | 0 |
| TFG--NTRK1 | 79 | 1 | 79.00 | 1.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 577 | 7 | 0.14 | 10.12 | GT | 1.9329 | AG | 1.6895 | 0.8153 | 883 | 0 |
| SLC34A2--ROS1 | 75 | 0 | 75.00 | 0.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 7 | 76.00 | 9.50 | GT | 1.8892 | AG | 1.7465 | 0.7643 | 999 | 0 |
| SLC45A3--BRAF | 65 | 0 | 65.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 417 | 66.00 | 0.16 | GT | 1.5628 | AG | 1.7465 | 0.6624 | 2599 | 0 |
| PAX8--PPARG | 46 | 0 | 46.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 12 | 0 | 3.62 | 47.00 | GT | 1.8295 | AG | 1.9329 | 0.4688 | 1923 | 0 |
| EGFR--SEPTIN14 | 43 | 0 | 43.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 0 | 1 | 44.00 | 22.00 | GT | 1.8892 | AG | 1.9899 | 0.4382 | 658 | 0 |
| FBXO25--AC110079.1 | 5 | 0 | 5.00 | 0.00 | FBXO25^ENSG00000147364.17 | 7247 | chr8:435707:+ | AC110079.1^ENSG00000260404.3 | 27226 | chr4:118595913:+ | INCL_NON_REF_SPLICE | YES | 46 | 35 | 0.13 | 0.17 | GT | 1.7819 | GG | 1.8892 | 0.051 | 6471 | 0 |
| TPTE--MRPS31P2 | 3 | 0 | 3.00 | 0.00 | TPTE^ENSG00000274391.5 | 9516 | chr21:10559544:+ | MRPS31P2^ENSG00000232894.1 | 27275 | chr13:19570288:- | ONLY_REF_SPLICE | YES | 0 | 0 | 4.00 | 4.00 | GT | 1.8295 | AG | 1.9656 | 0.0306 | 4299 | 0 |
| KDM1A--CAPZA1 | 2 | 0 | 2.00 | 0.00 | KDM1A^ENSG00000004487.17 | 10091 | chr1:23059167:+ | CAPZA1^ENSG00000116489.13 | 27006 | chr1:112647210:+ | ONLY_REF_SPLICE | YES | 474 | 294 | 0.01 | 0.01 | GT | 1.8256 | AG | 1.9899 | 0.0204 | 4287 | 0 |
| SRRD--ACTL6A | 2 | 0 | 2.00 | 0.00 | SRRD^ENSG00000100104.13 | 4926 | chr22:26490198:+ | ACTL6A^ENSG00000136518.17 | 17413 | chr3:179575403:+ | ONLY_REF_SPLICE | YES | 106 | 193 | 0.03 | 0.02 | GT | 1.6895 | AG | 1.4566 | 0.0204 | 683 | 0 |
| FHOD1--RRN3P1 | 1 | 0 | 1.00 | 0.00 | FHOD1^ENSG00000135723.14 | 1272 | chr16:67247210:- | RRN3P1^ENSG00000248124.8 | 15872 | chr16:21818761:- | ONLY_REF_SPLICE | YES | 183 | 75 | 0.01 | 0.03 | GT | 1.7819 | AG | 1.9086 | 0.0102 | 1824 | 0 |
24 rows