#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
FGFR3--TACC3	123	0	123.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	6	720	17.71	0.17	GT	1.8892	AG	1.7819	1.2558	627	0
TMPRSS2--ERG	97	0	97.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	28751	chr21:38584945:-	ONLY_REF_SPLICE	YES	0	0	98.00	98.00	GT	1.6895	AG	1.9219	0.9904	1104	0
NCOA4--RET	30	0	30.00	0.00	NCOA4^ENSG00000266412.6	9075	chr10:46012883:-	RET^ENSG00000165731.20	30127	chr10:43116584:+	ONLY_REF_SPLICE	YES	588	6	0.05	4.43	GT	1.9086	AG	1.8323	0.3063	5144	0
CCDC6--RET	23	0	23.00	0.00	CCDC6^ENSG00000108091.11	1435	chr10:59906122:-	RET^ENSG00000165731.20	31587	chr10:43116584:+	ONLY_REF_SPLICE	YES	419	6	0.06	3.43	GT	1.8892	AG	1.8323	0.2348	2092	0
ETV6--NTRK3	22	1	22.00	1.00	ETV6^ENSG00000139083.11	11237	chr12:11869969:+	NTRK3^ENSG00000140538.16	46238	chr15:87940753:-	ONLY_REF_SPLICE	YES	608	0	0.04	24.00	GT	1.7819	AG	1.9656	0.2348	1252	0
TFG--NTRK1	21	0	21.00	0.00	TFG^ENSG00000114354.15	9135	chr3:100732672:+	NTRK1^ENSG00000198400.13	37655	chr1:156874571:+	ONLY_REF_SPLICE	YES	342	1	0.06	11.00	GT	1.9329	AG	1.6895	0.2144	883	0
TPM3--NTRK1	21	0	21.00	0.00	TPM3^ENSG00000143549.21	13389	chr1:154170400:-	NTRK1^ENSG00000198400.13	42070	chr1:156874571:+	ONLY_REF_SPLICE	YES	2028	1	0.01	11.00	GT	1.9329	AG	1.6895	0.2144	355	0
FGFR3--BAIAP2L1	20	0	20.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	BAIAP2L1^ENSG00000006453.14	16927	chr7:98362432:-	ONLY_REF_SPLICE	YES	6	9	3.00	2.10	GT	1.8892	AG	1.8062	0.2042	1171	0
SLC45A3--BRAF	19	0	19.00	0.00	SLC45A3^ENSG00000158715.6	1116	chr1:205680394:-	BRAF^ENSG00000157764.14	25172	chr7:140794467:-	ONLY_REF_SPLICE	YES	1	331	10.00	0.06	GT	1.5628	AG	1.7465	0.194	2599	0
KIF5B--RET	18	0	18.00	0.00	KIF5B^ENSG00000170759.11	19977	chr10:32017143:-	RET^ENSG00000165731.20	38832	chr10:43114480:+	ONLY_REF_SPLICE	YES	285	0	0.07	19.00	GT	1.9656	AG	1.9656	0.1838	3178	0
LMNA--NTRK1	16	0	16.00	0.00	LMNA^ENSG00000160789.23	17733	chr1:156130773:+	NTRK1^ENSG00000198400.13	40289	chr1:156874906:+	ONLY_REF_SPLICE	YES	452	8	0.04	1.89	GT	1.7465	AG	1.5058	0.1634	947	0
PAX8--PPARG	15	0	15.00	0.00	PAX8^ENSG00000125618.18	9714	chr2:113235394:-	PPARG^ENSG00000132170.23	31404	chr3:12379704:+	ONLY_REF_SPLICE	YES	13	3	1.14	4.00	GT	1.8295	AG	1.9329	0.1532	1923	0
CD74--ROS1	14	0	14.00	0.00	CD74^ENSG00000019582.16	4990	chr5:150404680:-	ROS1^ENSG00000047936.11	48731	chr6:117324415:-	ONLY_REF_SPLICE	YES	7517	0	0.00	15.00	GT	1.7819	AG	1.7465	0.1429	2407	0
SLC34A2--ROS1	8	0	8.00	0.00	SLC34A2^ENSG00000157765.13	6084	chr4:25664330:+	ROS1^ENSG00000047936.11	58025	chr6:117324415:-	ONLY_REF_SPLICE	YES	3	0	2.25	9.00	GT	1.8892	AG	1.7465	0.0817	999	0
EGFR--AC069287.1	3	0	3.00	0.00	EGFR^ENSG00000146648.19	30734	chr7:55200413:+	AC069287.1^ENSG00000254468.2	45121	chr11:121426:-	ONLY_REF_SPLICE	YES	0	25	4.00	0.15	GT	1.8892	AG	1.9899	0.0306	1220	0
ELK3--MTMR2	3	0	3.00	0.00	ELK3^ENSG00000111145.8	5801	chr12:96223773:+	MTMR2^ENSG00000087053.20	29904	chr11:95865676:-	ONLY_REF_SPLICE	YES	11	132	0.33	0.03	GT	1.8323	AG	1.8892	0.0306	1285	0
ADAM9--ERICH1	2	0	2.00	0.00	ADAM9^ENSG00000168615.13	1407	chr8:38997160:+	ERICH1^ENSG00000104714.14	44421	chr8:716007:-	ONLY_REF_SPLICE	YES	168	82	0.02	0.04	GT	1.5329	AG	1.5058	0.0204	1774	0
EML4--ALK	2	0	2.00	0.00	EML4^ENSG00000143924.19	17400	chr2:42295516:+	ALK^ENSG00000171094.18	59003	chr2:29223528:-	ONLY_REF_SPLICE	YES	159	4	0.02	0.60	GT	1.6895	AG	1.9086	0.0204	1550	0
SLC29A1--OGT	2	0	2.00	0.00	SLC29A1^ENSG00000112759.19	10412	chr6:44232428:+	OGT^ENSG00000147162.14	23632	chrX:71547907:+	ONLY_REF_SPLICE	YES	220	702	0.01	0.00	GT	1.8323	AG	1.7819	0.0204	807	0
SPECC1L--CYFIP2	2	0	2.00	0.00	SPECC1L^ENSG00000100014.20	6810	chr22:24313466:+	CYFIP2^ENSG00000055163.20	43825	chr5:157307761:+	ONLY_REF_SPLICE	YES	152	459	0.02	0.01	GT	1.8892	AG	1.6895	0.0204	1800	0
TRIM5--NSD1	2	0	2.00	0.00	TRIM5^ENSG00000132256.19	11007	chr11:5678204:-	NSD1^ENSG00000165671.21	25807	chr5:177191884:+	ONLY_REF_SPLICE	YES	242	306	0.01	0.01	GT	1.9656	AG	1.8295	0.0204	1190	0
YY1AP1--SEC24C	2	0	2.00	0.00	YY1AP1^ENSG00000163374.20	10098	chr1:155670320:-	SEC24C^ENSG00000176986.16	21667	chr10:73759622:+	ONLY_REF_SPLICE	YES	248	296	0.01	0.01	GT	1.7819	AG	1.8256	0.0204	203	0