File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_13.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_13.FusionInspector.fusions.abridged.tsv
- Size
- 4.7 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:05 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 302 | 1 | 302.00 | 0.98 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 13 | 1528 | 21.71 | 0.20 | GT | 1.8892 | AG | 1.7819 | 3.0829 | 627 | 0 |
| FGFR3--TACC3 | 5 | 1 | 5.00 | 0.02 | FGFR3^ENSG00000068078.20 | 9872 | chr4:1806928:+ | TACC3^ENSG00000013810.20 | 27587 | chr4:1739699:+ | INCL_NON_REF_SPLICE | YES | 30 | 1486 | 0.23 | 0.00 | AC | 1.8892 | AG | 1.7819 | 0.0511 | 633 | 0 |
| TMPRSS2--ERG | 138 | 0 | 138.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 10 | 139.00 | 12.64 | GT | 1.6895 | AG | 1.9219 | 1.4042 | 1104 | 0 |
| ETV6--NTRK3 | 91 | 0 | 91.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1374 | 3 | 0.07 | 23.00 | GT | 1.7819 | AG | 1.9656 | 0.9259 | 1252 | 0 |
| LMNA--NTRK1 | 75 | 2 | 75.00 | 2.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1020 | 20 | 0.08 | 3.71 | GT | 1.7465 | AG | 1.5058 | 0.7835 | 947 | 0 |
| FGFR3--BAIAP2L1 | 61 | 0 | 61.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 13 | 19 | 4.43 | 3.10 | GT | 1.8892 | AG | 1.8062 | 0.6207 | 1171 | 0 |
| EML4--ALK | 56 | 0 | 56.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 304 | 7 | 0.19 | 7.12 | GT | 1.6895 | AG | 1.9086 | 0.5698 | 1550 | 0 |
| CD74--ROS1 | 53 | 1 | 53.00 | 1.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 11261 | 5 | 0.00 | 9.17 | GT | 1.7819 | AG | 1.7465 | 0.5495 | 2407 | 0 |
| TPM3--NTRK1 | 50 | 0 | 50.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3987 | 3 | 0.01 | 12.75 | GT | 1.9329 | AG | 1.6895 | 0.5088 | 355 | 0 |
| SLC34A2--ROS1 | 49 | 0 | 49.00 | 0.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 1 | 5 | 25.00 | 8.33 | GT | 1.8892 | AG | 1.7465 | 0.4986 | 999 | 0 |
| KIF5B--RET | 46 | 1 | 46.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 699 | 2 | 0.07 | 16.00 | GT | 1.9656 | AG | 1.9656 | 0.4783 | 3178 | 0 |
| CCDC6--RET | 46 | 0 | 46.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 918 | 36 | 0.05 | 1.27 | GT | 1.8892 | AG | 1.8323 | 0.4681 | 2092 | 0 |
| NCOA4--RET | 44 | 0 | 44.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1194 | 36 | 0.04 | 1.22 | GT | 1.9086 | AG | 1.8323 | 0.4477 | 5144 | 0 |
| EGFR--SEPTIN14 | 32 | 0 | 32.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 1 | 1 | 16.50 | 16.50 | GT | 1.8892 | AG | 1.9899 | 0.3256 | 658 | 0 |
| PAX8--PPARG | 29 | 0 | 29.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 36 | 0 | 0.81 | 30.00 | GT | 1.8295 | AG | 1.9329 | 0.2951 | 1923 | 0 |
| SLC45A3--BRAF | 27 | 0 | 27.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 794 | 28.00 | 0.04 | GT | 1.5628 | AG | 1.7465 | 0.2747 | 2599 | 0 |
| TFG--NTRK1 | 20 | 0 | 20.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 736 | 3 | 0.03 | 5.25 | GT | 1.9329 | AG | 1.6895 | 0.2035 | 883 | 0 |
| FBXO25--SEPTIN14 | 8 | 0 | 8.00 | 0.00 | FBXO25^ENSG00000147364.17 | 7247 | chr8:435707:+ | SEPTIN14^ENSG00000154997.9 | 37100 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 68 | 1 | 0.13 | 4.50 | GT | 1.7819 | AG | 1.9899 | 0.0814 | 750 | 0 |
| SLAMF1--LSM14A | 6 | 0 | 6.00 | 0.00 | SLAMF1^ENSG00000117090.15 | 1426 | chr1:160646870:- | LSM14A^ENSG00000257103.9 | 20863 | chr19:34215124:+ | ONLY_REF_SPLICE | YES | 1110 | 434 | 0.01 | 0.02 | GT | 1.8062 | AG | 1.8295 | 0.0611 | 1663 | 0 |
| RCC1--GNAS | 5 | 0 | 2.50 | 0.00 | RCC1^ENSG00000180198.16 | 2175 | chr1:28508160:+ | GNAS^ENSG00000087460.28 | 34807 | chr20:58895612:+ | ONLY_REF_SPLICE | YES | 13 | 3072 | 0.43 | 0.00 | GT | 1.7968 | AG | 1.8892 | 0.0254 | 2106 | 0 |
| SNHG3--GNAS | 5 | 0 | 2.50 | 0.00 | SNHG3^ENSG00000242125.3 | 3181 | chr1:28508160:+ | GNAS^ENSG00000087460.28 | 24843 | chr20:58895612:+ | ONLY_REF_SPLICE | YES | 13 | 3072 | 0.43 | 0.00 | GT | 1.7968 | AG | 1.8892 | 0.0254 | 332 | 0 |
| CLDN15--FIS1 | 3 | 0 | 3.00 | 0.00 | CLDN15^ENSG00000106404.14 | 2456 | chr7:101237365:- | FIS1^ENSG00000214253.9 | 11790 | chr7:101244139:- | ONLY_REF_SPLICE | YES | 81 | 520 | 0.05 | 0.01 | GT | 1.5656 | AG | 1.3710 | 0.0305 | 1610 | 0 |
| PPP1CB--RBMX | 2 | 0 | 2.00 | 0.00 | PPP1CB^ENSG00000213639.10 | 1537 | chr2:28752176:+ | RBMX^ENSG00000147274.14 | 21757 | chrX:136875585:- | ONLY_REF_SPLICE | YES | 1581 | 717 | 0.00 | 0.00 | GT | 1.6895 | AG | 1.9086 | 0.0204 | 1480 | 0 |
24 rows