File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_18.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_18.FusionInspector.fusions.abridged.tsv
- Size
- 4.0 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:07 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1265 | 2 | 1265.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 24 | 1306 | 50.72 | 0.97 | GT | 1.8892 | AG | 1.7819 | 12.9095 | 627 | 0 |
| TMPRSS2--ERG | 999 | 0 | 999.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 1 | 24 | 500.00 | 40.00 | GT | 1.6895 | AG | 1.9219 | 10.1788 | 1104 | 0 |
| TPM3--NTRK1 | 407 | 5 | 407.00 | 5.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3896 | 10 | 0.11 | 37.55 | GT | 1.9329 | AG | 1.6895 | 4.1978 | 355 | 0 |
| FGFR3--BAIAP2L1 | 388 | 1 | 388.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 25 | 16 | 15.00 | 22.94 | GT | 1.8892 | AG | 1.8062 | 3.9635 | 1171 | 0 |
| LMNA--NTRK1 | 386 | 6 | 386.00 | 6.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1867 | 95 | 0.21 | 4.09 | GT | 1.7465 | AG | 1.5058 | 3.9941 | 947 | 0 |
| ETV6--NTRK3 | 360 | 1 | 360.00 | 1.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1313 | 6 | 0.28 | 51.71 | GT | 1.7819 | AG | 1.9656 | 3.6782 | 1252 | 0 |
| NCOA4--RET | 308 | 0 | 308.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1282 | 161 | 0.24 | 1.91 | GT | 1.9086 | AG | 1.8323 | 3.1382 | 5144 | 0 |
| KIF5B--RET | 277 | 4 | 277.00 | 4.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 727 | 5 | 0.39 | 47.00 | GT | 1.9656 | AG | 1.9656 | 2.8632 | 3178 | 0 |
| SLC34A2--ROS1 | 271 | 4 | 271.00 | 4.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 22 | 276.00 | 12.00 | GT | 1.8892 | AG | 1.7465 | 2.802 | 999 | 0 |
| CCDC6--RET | 256 | 1 | 256.00 | 1.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 894 | 161 | 0.29 | 1.59 | GT | 1.8892 | AG | 1.8323 | 2.6186 | 2092 | 0 |
| EML4--ALK | 226 | 0 | 226.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 331 | 7 | 0.68 | 28.38 | GT | 1.6895 | AG | 1.9086 | 2.3027 | 1550 | 0 |
| CD74--ROS1 | 197 | 0 | 197.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 11590 | 22 | 0.02 | 8.61 | GT | 1.7819 | AG | 1.7465 | 2.0072 | 2407 | 0 |
| TFG--NTRK1 | 151 | 2 | 151.00 | 2.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 1156 | 10 | 0.13 | 14.00 | GT | 1.9329 | AG | 1.6895 | 1.5589 | 883 | 0 |
| EGFR--SEPTIN14 | 135 | 1 | 135.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 3 | 2 | 34.25 | 45.67 | GT | 1.8892 | AG | 1.9899 | 1.3857 | 658 | 0 |
| SLC45A3--BRAF | 129 | 0 | 129.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 643 | 130.00 | 0.20 | GT | 1.5628 | AG | 1.7465 | 1.3144 | 2599 | 0 |
| PAX8--PPARG | 124 | 1 | 124.00 | 1.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 30 | 4 | 4.06 | 25.20 | GT | 1.8295 | AG | 1.9329 | 1.2736 | 1923 | 0 |
| KMT5A--ADAP1 | 3 | 0 | 1.50 | 0.00 | KMT5A^ENSG00000183955.13 | 1436 | chr12:123384208:+ | ADAP1^ENSG00000105963.15 | 21142 | chr7:926644:- | ONLY_REF_SPLICE | YES | 0 | 496 | 4.00 | 0.01 | GT | 1.8892 | AG | 1.7968 | 0.0153 | 1237 | 0 |
| KMT5A--COX19 | 3 | 0 | 1.50 | 0.00 | KMT5A^ENSG00000183955.13 | 1436 | chr12:123384208:+ | COX19^ENSG00000240230.6 | 25817 | chr7:926644:- | ONLY_REF_SPLICE | YES | 0 | 342 | 4.00 | 0.01 | GT | 1.8892 | AG | 1.7968 | 0.0153 | 2695 | 0 |
| PIEZO2--SEC24B | 1 | 0 | 1.00 | 0.00 | PIEZO2^ENSG00000154864.13 | 3141 | chr18:11066127:- | SEC24B^ENSG00000138802.11 | 78806 | chr4:109491327:+ | ONLY_REF_SPLICE | YES | 238 | 263 | 0.01 | 0.01 | GT | 1.7465 | AG | 1.8892 | 0.0102 | 3195 | 0 |
20 rows