File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_11.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_11.FusionInspector.fusions.abridged.tsv
- Size
- 4.7 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:08 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 885 | 3 | 885.00 | 3.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 20 | 1577 | 42.33 | 0.56 | GT | 1.8892 | AG | 1.7819 | 9.042 | 627 | 0 |
| TMPRSS2--ERG | 623 | 0 | 623.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 2 | 19 | 208.00 | 31.20 | GT | 1.6895 | AG | 1.9219 | 6.3437 | 1104 | 0 |
| FGFR3--BAIAP2L1 | 318 | 1 | 318.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 21 | 19 | 14.55 | 16.00 | GT | 1.8892 | AG | 1.8062 | 3.2482 | 1171 | 0 |
| LMNA--NTRK1 | 274 | 2 | 274.00 | 2.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1798 | 85 | 0.15 | 3.22 | GT | 1.7465 | AG | 1.5058 | 2.8104 | 947 | 0 |
| LMNA--NTRK1 | 4 | 0 | 4.00 | 0.00 | LMNA^ENSG00000160789.23 | 17725 | chr1:156130765:+ | NTRK1^ENSG00000198400.13 | 40284 | chr1:156874901:+ | INCL_NON_REF_SPLICE | YES | 1842 | 57 | 0.00 | 0.09 | TG | 1.7968 | CC | 1.8892 | 0.0407 | 938 | 0 |
| ETV6--NTRK3 | 238 | 1 | 238.00 | 1.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1467 | 7 | 0.16 | 30.00 | GT | 1.7819 | AG | 1.9656 | 2.4336 | 1252 | 0 |
| NCOA4--RET | 213 | 0 | 213.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1485 | 124 | 0.14 | 1.71 | GT | 1.9086 | AG | 1.8323 | 2.1689 | 5144 | 0 |
| TPM3--NTRK1 | 212 | 1 | 212.00 | 1.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 4013 | 10 | 0.05 | 19.45 | GT | 1.9329 | AG | 1.6895 | 2.1689 | 355 | 0 |
| SLC34A2--ROS1 | 198 | 5 | 198.00 | 5.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 19 | 204.00 | 10.20 | GT | 1.8892 | AG | 1.7465 | 2.067 | 999 | 0 |
| CCDC6--RET | 156 | 1 | 156.00 | 1.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1027 | 124 | 0.15 | 1.26 | GT | 1.8892 | AG | 1.8323 | 1.5987 | 2092 | 0 |
| KIF5B--RET | 138 | 1 | 138.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 704 | 5 | 0.20 | 23.33 | GT | 1.9656 | AG | 1.9656 | 1.4154 | 3178 | 0 |
| CD74--ROS1 | 135 | 3 | 135.00 | 3.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 12268 | 18 | 0.01 | 7.32 | GT | 1.7819 | AG | 1.7465 | 1.4051 | 2407 | 0 |
| EML4--ALK | 117 | 0 | 117.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 319 | 19 | 0.37 | 5.90 | GT | 1.6895 | AG | 1.9086 | 1.1913 | 1550 | 0 |
| EGFR--SEPTIN14 | 106 | 1 | 106.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 6 | 2 | 15.43 | 36.00 | GT | 1.8892 | AG | 1.9899 | 1.0895 | 658 | 0 |
| TFG--NTRK1 | 93 | 1 | 93.00 | 1.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 895 | 10 | 0.11 | 8.64 | GT | 1.9329 | AG | 1.6895 | 0.9572 | 883 | 0 |
| PAX8--PPARG | 88 | 0 | 88.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 52 | 6 | 1.68 | 12.71 | GT | 1.8295 | AG | 1.9329 | 0.8961 | 1923 | 0 |
| SLC45A3--BRAF | 57 | 0 | 57.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 821 | 58.00 | 0.07 | GT | 1.5628 | AG | 1.7465 | 0.5804 | 2599 | 0 |
| RCC1--UBE2D2 | 4 | 0 | 2.00 | 0.00 | RCC1^ENSG00000180198.16 | 2175 | chr1:28508160:+ | UBE2D2^ENSG00000131508.16 | 23111 | chr5:139600372:+ | ONLY_REF_SPLICE | YES | 8 | 1184 | 0.56 | 0.00 | GT | 1.7968 | AG | 1.8256 | 0.0204 | 3173 | 0 |
| SNHG3--UBE2D2 | 4 | 0 | 2.00 | 0.00 | SNHG3^ENSG00000242125.3 | 3181 | chr1:28508160:+ | UBE2D2^ENSG00000131508.16 | 13147 | chr5:139600372:+ | ONLY_REF_SPLICE | YES | 7 | 1184 | 0.62 | 0.00 | GT | 1.7968 | AG | 1.8256 | 0.0204 | 1802 | 0 |
| SND1--CDK14 | 3 | 0 | 3.00 | 0.00 | SND1^ENSG00000197157.11 | 24964 | chr7:127991056:+ | CDK14^ENSG00000058091.17 | 68204 | chr7:91207165:+ | ONLY_REF_SPLICE | YES | 2146 | 36 | 0.00 | 0.11 | GT | 1.8295 | AG | 1.8892 | 0.0305 | 1067 | 0 |
| ABI1--NISCH | 2 | 0 | 2.00 | 0.00 | ABI1^ENSG00000136754.18 | 9263 | chr10:26765218:- | NISCH^ENSG00000010322.16 | 34949 | chr3:52484513:+ | ONLY_REF_SPLICE | YES | 606 | 302 | 0.00 | 0.01 | GT | 1.9656 | AG | 1.9219 | 0.0204 | 2251 | 0 |
| MRPL46--AKAP13 | 2 | 0 | 2.00 | 0.00 | MRPL46^ENSG00000259494.2 | 3312 | chr15:88464703:- | AKAP13^ENSG00000170776.22 | 34359 | chr15:85639374:+ | ONLY_REF_SPLICE | YES | 172 | 336 | 0.02 | 0.01 | GT | 1.9219 | AG | 1.5546 | 0.0204 | 162 | 0 |
| TMEM138--TENT2 | 1 | 0 | 1.00 | 0.00 | TMEM138^ENSG00000149483.12 | 6655 | chr11:61367998:+ | TENT2^ENSG00000164329.13 | 22586 | chr5:79645123:+ | ONLY_REF_SPLICE | YES | 444 | 523 | 0.00 | 0.00 | GT | 1.9656 | AG | 1.9656 | 0.0102 | 1012 | 0 |
24 rows