File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_34.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_34.FusionInspector.fusions.abridged.tsv
- Size
- 5.9 KB
- Workflow Run
- dev_rna_exp0001R_5f1fa79
- Published
- Mar 09, 2026 12:10 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1466 | 5 | 1466.00 | 4.99 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 30 | 1102 | 47.48 | 1.33 | GT | 1.8892 | AG | 1.7819 | 14.996 | 627 | 0 |
| FGFR3--TACC3 | 3 | 5 | 3.00 | 0.01 | FGFR3^ENSG00000068078.20 | 9882 | chr4:1806938:+ | TACC3^ENSG00000013810.20 | 27596 | chr4:1739708:+ | INCL_NON_REF_SPLICE | YES | 11 | 1143 | 0.75 | 0.01 | GT | 1.8892 | AG | 1.5058 | 0.0307 | 620 | 0 |
| TMPRSS2--ERG | 840 | 0 | 840.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 1 | 29 | 420.50 | 28.03 | GT | 1.6895 | AG | 1.9219 | 8.5634 | 1104 | 0 |
| TMPRSS2--ERG | 3 | 0 | 3.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4646 | chr21:41508087:- | ERG^ENSG00000157554.19 | 28747 | chr21:38584949:- | INCL_NON_REF_SPLICE | YES | 5 | 0 | 0.67 | 4.00 | CG | 1.5628 | AT | 1.9656 | 0.0306 | 1100 | 0 |
| LMNA--NTRK1 | 418 | 2 | 418.00 | 1.97 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1858 | 93 | 0.23 | 4.48 | GT | 1.7465 | AG | 1.5058 | 4.2814 | 947 | 0 |
| LMNA--NTRK1 | 3 | 2 | 3.00 | 0.01 | LMNA^ENSG00000160789.23 | 17728 | chr1:156130768:+ | NTRK1^ENSG00000198400.13 | 40285 | chr1:156874902:+ | INCL_NON_REF_SPLICE | NO | 1905 | 66 | 0.00 | 0.09 | CC | 1.5546 | CA | 1.7819 | 0.0307 | 941 | 0 |
| LMNA--NTRK1 | 3 | 2 | 3.00 | 0.01 | LMNA^ENSG00000160789.23 | 17734 | chr1:156130774:+ | NTRK1^ENSG00000198400.13 | 40292 | chr1:156874909:+ | INCL_NON_REF_SPLICE | YES | 1858 | 107 | 0.00 | 0.06 | TG | 1.7465 | TC | 1.4566 | 0.0307 | 949 | 0 |
| FGFR3--BAIAP2L1 | 414 | 1 | 414.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 30 | 15 | 13.42 | 26.00 | GT | 1.8892 | AG | 1.8062 | 4.2307 | 1171 | 0 |
| ETV6--NTRK3 | 368 | 0 | 368.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1163 | 1 | 0.32 | 184.50 | GT | 1.7819 | AG | 1.9656 | 3.7516 | 1252 | 0 |
| TPM3--NTRK1 | 344 | 0 | 344.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3685 | 8 | 0.09 | 38.33 | GT | 1.9329 | AG | 1.6895 | 3.5069 | 355 | 0 |
| NCOA4--RET | 304 | 2 | 304.00 | 2.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1232 | 123 | 0.25 | 2.48 | GT | 1.9086 | AG | 1.8323 | 3.1195 | 5144 | 0 |
| EML4--ALK | 226 | 0 | 226.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 296 | 18 | 0.76 | 11.95 | GT | 1.6895 | AG | 1.9086 | 2.304 | 1550 | 0 |
| SLC34A2--ROS1 | 223 | 3 | 223.00 | 3.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 24 | 227.00 | 9.08 | GT | 1.8892 | AG | 1.7465 | 2.304 | 999 | 0 |
| CCDC6--RET | 220 | 3 | 220.00 | 3.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 821 | 123 | 0.27 | 1.81 | GT | 1.8892 | AG | 1.8323 | 2.2734 | 2092 | 0 |
| CD74--ROS1 | 220 | 1 | 220.00 | 1.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 11954 | 24 | 0.02 | 8.88 | GT | 1.7819 | AG | 1.7465 | 2.253 | 2407 | 0 |
| KIF5B--RET | 215 | 1 | 215.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 650 | 5 | 0.33 | 36.17 | GT | 1.9656 | AG | 1.9656 | 2.202 | 3178 | 0 |
| TFG--NTRK1 | 129 | 0 | 129.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 900 | 8 | 0.14 | 14.44 | GT | 1.9329 | AG | 1.6895 | 1.3151 | 883 | 0 |
| PAX8--PPARG | 122 | 0 | 122.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 31 | 5 | 3.84 | 20.50 | GT | 1.8295 | AG | 1.9329 | 1.2437 | 1923 | 0 |
| SLC45A3--BRAF | 117 | 0 | 117.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 621 | 118.00 | 0.19 | GT | 1.5628 | AG | 1.7465 | 1.1928 | 2599 | 0 |
| EGFR--SEPTIN14 | 88 | 4 | 88.00 | 4.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 4 | 2 | 18.60 | 31.00 | GT | 1.8892 | AG | 1.9899 | 0.9379 | 658 | 0 |
| AL596275.1--RELA | 6 | 0 | 6.00 | 0.00 | AL596275.1^ENSG00000234080.3 | 1114 | chr1:50326244:+ | RELA^ENSG00000173039.19 | 11725 | chr11:65654892:- | INCL_NON_REF_SPLICE | YES | 4 | 879 | 1.40 | 0.01 | CG | 1.2310 | CC | 1.5546 | 0.0612 | 270 | 0 |
| RPL23AP53--SEPTIN14 | 6 | 0 | 6.00 | 0.00 | RPL23AP53^ENSG00000223508.5 | 1103 | chr8:232129:- | SEPTIN14^ENSG00000154997.9 | 19655 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 5 | 2 | 1.17 | 2.33 | GT | 1.9086 | AG | 1.9899 | 0.0612 | 221 | 0 |
| RPL23AP53--SEPTIN14 | 1 | 0 | 1.00 | 0.00 | RPL23AP53^ENSG00000223508.5 | 4131 | chr8:219290:- | SEPTIN14^ENSG00000154997.9 | 19655 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 4 | 2 | 0.40 | 0.67 | GT | 1.8323 | AG | 1.9899 | 0.0102 | 1016 | 0 |
| PPM1D--BCAS3 | 5 | 0 | 5.00 | 0.00 | PPM1D^ENSG00000170836.12 | 7647 | chr17:60656841:+ | BCAS3^ENSG00000141376.23 | 16597 | chr17:60679453:+ | ONLY_REF_SPLICE | YES | 113 | 103 | 0.05 | 0.06 | GT | 1.7056 | AG | 1.5656 | 0.051 | 2768 | 0 |
| PPM1D--BCAS3 | 1 | 0 | 1.00 | 0.00 | PPM1D^ENSG00000170836.12 | 7647 | chr17:60656841:+ | BCAS3^ENSG00000141376.23 | 17685 | chr17:60683982:+ | ONLY_REF_SPLICE | YES | 113 | 179 | 0.02 | 0.01 | GT | 1.7056 | AG | 1.9656 | 0.0102 | 1961 | 0 |
| OR2T2--OR2T27 | 4 | 0 | 4.00 | 0.00 | OR2T2^ENSG00000196240.5 | 3499 | chr1:248449392:+ | OR2T27^ENSG00000187701.4 | 12219 | chr1:248650888:- | ONLY_REF_SPLICE | YES | 1 | 42 | 2.50 | 0.12 | GT | 1.6402 | AG | 1.8323 | 0.0408 | 1100 | 0 |
| TMEM185A--SERINC1 | 3 | 0 | 3.00 | 0.00 | TMEM185A^ENSG00000269556.8 | 1370 | chrX:149631543:- | SERINC1^ENSG00000111897.7 | 17893 | chr6:122458681:- | ONLY_REF_SPLICE | YES | 91 | 239 | 0.04 | 0.02 | GT | 1.9329 | AG | 1.8295 | 0.0306 | 4488 | 0 |
| SIN3B--THEMIS2 | 2 | 0 | 2.00 | 0.00 | SIN3B^ENSG00000127511.10 | 17465 | chr19:16871398:+ | THEMIS2^ENSG00000130775.16 | 34156 | chr1:27885295:+ | ONLY_REF_SPLICE | YES | 108 | 285 | 0.03 | 0.01 | GT | 1.9329 | AG | 1.7465 | 0.0204 | 1260 | 0 |
| TMSB10--PPP4R3A | 2 | 0 | 2.00 | 0.00 | TMSB10^ENSG00000034510.6 | 1063 | chr2:84905718:+ | PPP4R3A^ENSG00000100796.18 | 9221 | chr14:91482193:- | ONLY_REF_SPLICE | YES | 427 | 391 | 0.01 | 0.01 | GT | 1.8256 | AG | 1.8323 | 0.0204 | 647 | 0 |
30 rows