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Filename
FFPE_V4_0001_RNA_0005_23KMKGLT4_7.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23KMKGLT4/nfcore_rnafusion_100M__5f1fa79--20260304-094520/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_7.FusionInspector.fusions.abridged.tsv
Size
4.9 KB
Workflow Run
dev_rna_exp0001R_5f1fa79
Published
Mar 09, 2026 12:11 PM

Content

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
FGFR3--TACC3 82 0 82.00 0.00 FGFR3^ENSG00000068078.20 9878 chr4:1806934:+ TACC3^ENSG00000013810.20 27590 chr4:1739702:+ ONLY_REF_SPLICE YES 7 1793 10.38 0.05 GT 1.8892 AG 1.7819 0.8349 627 0
TMPRSS2--ERG 60 0 60.00 0.00 TMPRSS2^ENSG00000184012.14 4652 chr21:41508081:- ERG^ENSG00000157554.19 28751 chr21:38584945:- ONLY_REF_SPLICE YES 0 4 61.00 12.20 GT 1.6895 AG 1.9219 0.6109 1104 0
FGFR3--BAIAP2L1 27 0 27.00 0.00 FGFR3^ENSG00000068078.20 9878 chr4:1806934:+ BAIAP2L1^ENSG00000006453.14 16927 chr7:98362432:- ONLY_REF_SPLICE YES 7 13 3.50 2.00 GT 1.8892 AG 1.8062 0.2749 1171 0
ETV6--NTRK3 23 0 23.00 0.00 ETV6^ENSG00000139083.11 11237 chr12:11869969:+ NTRK3^ENSG00000140538.16 46238 chr15:87940753:- ONLY_REF_SPLICE YES 1308 0 0.02 24.00 GT 1.7819 AG 1.9656 0.2342 1252 0
CCDC6--RET 20 0 20.00 0.00 CCDC6^ENSG00000108091.11 1435 chr10:59906122:- RET^ENSG00000165731.20 31587 chr10:43116584:+ ONLY_REF_SPLICE YES 1010 6 0.02 3.00 GT 1.8892 AG 1.8323 0.2036 2092 0
TPM3--NTRK1 19 0 19.00 0.00 TPM3^ENSG00000143549.21 13389 chr1:154170400:- NTRK1^ENSG00000198400.13 42070 chr1:156874571:+ ONLY_REF_SPLICE YES 4634 1 0.00 10.00 GT 1.9329 AG 1.6895 0.1935 355 0
CD74--ROS1 18 0 18.00 0.00 CD74^ENSG00000019582.16 4990 chr5:150404680:- ROS1^ENSG00000047936.11 48731 chr6:117324415:- ONLY_REF_SPLICE YES 14091 1 0.00 9.50 GT 1.7819 AG 1.7465 0.1833 2407 0
SLC34A2--ROS1 15 0 15.00 0.00 SLC34A2^ENSG00000157765.13 6084 chr4:25664330:+ ROS1^ENSG00000047936.11 58025 chr6:117324415:- ONLY_REF_SPLICE YES 0 1 16.00 8.00 GT 1.8892 AG 1.7465 0.1527 999 0
TFG--NTRK1 15 0 15.00 0.00 TFG^ENSG00000114354.15 9135 chr3:100732672:+ NTRK1^ENSG00000198400.13 37655 chr1:156874571:+ ONLY_REF_SPLICE YES 664 1 0.02 8.00 GT 1.9329 AG 1.6895 0.1527 883 0
LMNA--NTRK1 13 0 13.00 0.00 LMNA^ENSG00000160789.23 17733 chr1:156130773:+ NTRK1^ENSG00000198400.13 40289 chr1:156874906:+ ONLY_REF_SPLICE YES 778 9 0.02 1.40 GT 1.7465 AG 1.5058 0.1324 947 0
NCOA4--RET 13 0 13.00 0.00 NCOA4^ENSG00000266412.6 9075 chr10:46012883:- RET^ENSG00000165731.20 30127 chr10:43116584:+ ONLY_REF_SPLICE YES 1164 6 0.01 2.00 GT 1.9086 AG 1.8323 0.1324 5144 0
EML4--ALK 12 0 12.00 0.00 EML4^ENSG00000143924.19 17400 chr2:42295516:+ ALK^ENSG00000171094.18 59003 chr2:29223528:- ONLY_REF_SPLICE YES 302 4 0.04 2.60 GT 1.6895 AG 1.9086 0.1222 1550 0
KIF5B--RET 12 0 12.00 0.00 KIF5B^ENSG00000170759.11 19977 chr10:32017143:- RET^ENSG00000165731.20 38832 chr10:43114480:+ ONLY_REF_SPLICE YES 677 1 0.02 6.50 GT 1.9656 AG 1.9656 0.1222 3178 0
SLC45A3--BRAF 10 0 10.00 0.00 SLC45A3^ENSG00000158715.6 1116 chr1:205680394:- BRAF^ENSG00000157764.14 25172 chr7:140794467:- ONLY_REF_SPLICE YES 1 773 5.50 0.01 GT 1.5628 AG 1.7465 0.1018 2599 0
AGAP3--HOXD11 6 0 6.00 0.00 AGAP3^ENSG00000133612.19 1978 chr7:151086808:+ HOXD11^ENSG00000128713.14 32027 chr2:176107582:+ INCL_NON_REF_SPLICE YES 5 0 1.17 7.00 GC 1.2310 CC 0.9183 0.0611 4 37
PAX8--PPARG 5 1 5.00 1.00 PAX8^ENSG00000125618.18 9714 chr2:113235394:- PPARG^ENSG00000132170.23 31404 chr3:12379704:+ ONLY_REF_SPLICE YES 36 4 0.19 1.40 GT 1.8295 AG 1.9329 0.0611 1923 0
EGFR--SEPTIN14 5 0 5.00 0.00 EGFR^ENSG00000146648.19 30734 chr7:55200413:+ SEPTIN14^ENSG00000154997.9 54769 chr7:55796092:- ONLY_REF_SPLICE YES 1 9 3.00 0.60 GT 1.8892 AG 1.9899 0.0509 658 0
OR2T2--OR2T27 5 0 5.00 0.00 OR2T2^ENSG00000196240.5 3499 chr1:248449392:+ OR2T27^ENSG00000187701.4 12219 chr1:248650888:- ONLY_REF_SPLICE YES 0 42 6.00 0.14 GT 1.6402 AG 1.8323 0.0509 1100 0
SEL1L--GPS2 3 0 3.00 0.00 SEL1L^ENSG00000071537.14 1179 chr14:81533675:- GPS2^ENSG00000132522.16 31924 chr17:7313291:- ONLY_REF_SPLICE YES 447 471 0.01 0.01 GT 1.5058 AG 1.7819 0.0305 3113 0
ACVR1B--TRIM8 2 0 2.00 0.00 ACVR1B^ENSG00000135503.13 13038 chr12:51991993:+ TRIM8^ENSG00000171206.15 25083 chr10:102654653:+ ONLY_REF_SPLICE YES 17 302 0.17 0.01 GT 1.8062 AG 1.8892 0.0204 417 0
CCL4--AC243960.1 2 0 2.00 0.00 CCL4^ENSG00000275302.2 1155 chr17:36103981:+ AC243960.1^ENSG00000268027.5 7419 chr19:41550138:+ ONLY_REF_SPLICE YES 1568 2 0.00 1.00 GT 1.7968 AG 1.7465 0.0204 278 0
FNDC3B--PIAS2 2 0 2.00 0.00 FNDC3B^ENSG00000075420.13 14063 chr3:172251541:+ PIAS2^ENSG00000078043.16 72345 chr18:46815349:- ONLY_REF_SPLICE YES 254 104 0.01 0.03 GT 1.9656 AG 1.3753 0.0204 1434 0
KCMF1--SPPL3 2 0 2.00 0.00 KCMF1^ENSG00000176407.18 1375 chr2:84971467:+ SPPL3^ENSG00000157837.16 30926 chr12:120769059:- ONLY_REF_SPLICE YES 356 446 0.01 0.01 GT 1.9899 AG 1.8323 0.0204 2772 0
RRM2--CUL4B 2 0 2.00 0.00 RRM2^ENSG00000171848.16 12334 chr2:10142375:+ CUL4B^ENSG00000158290.19 31536 chrX:120560625:- ONLY_REF_SPLICE YES 1 321 1.50 0.01 GT 1.9656 AG 1.5628 0.0204 843 0
25 rows