Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
5,tih_rna_sample_00427_23KMKGLT4_1,TTGGATTGTC-CGGCTGTTAG,70988989,69492146,1496843,0,0.0196,0.9789,0.0211,0.0000
5,tih_rna_sample_00430_23KMKGLT4_1,AATTGGCACA-CAGTCGGAGT,51022378,50076227,946151,0,0.0141,0.9815,0.0185,0.0000
5,tih_rna_sample_00129_23KMKGLT4_1,AGGCAATCGC-ATGAGTCTGT,74572029,73361187,1210842,0,0.0206,0.9838,0.0162,0.0000
5,tih_rna_sample_00434_23KMKGLT4_1,TGCAACACTA-CGTTCTGGTA,71015340,69638130,1377210,0,0.0196,0.9806,0.0194,0.0000
5,tih_rna_sample_00437_23KMKGLT4_1,GAATCGCCTG-CATTGACGGC,92475039,90248515,2226524,0,0.0255,0.9759,0.0241,0.0000
5,tih_rna_sample_00440_23KMKGLT4_1,TCGCATGACA-TTGGCCAATG,41273415,40419589,853826,0,0.0114,0.9793,0.0207,0.0000
5,tih_rna_sample_00441_23KMKGLT4_1,TCAATACGTG-GCTGCTAATA,80179256,78425850,1753406,0,0.0221,0.9781,0.0219,0.0000
5,tih_rna_sample_00134_23KMKGLT4_1,ATTCTCCACG-TCGATGATCG,33997624,33271546,726078,0,0.0094,0.9786,0.0214,0.0000
5,tih_rna_sample_00450_23KMKGLT4_1,TGTTACAGAG-TGTGTACCAG,67162381,64148825,3013556,0,0.0185,0.9551,0.0449,0.0000
5,tih_rna_sample_00451_23KMKGLT4_1,TTACGGACGC-ATTGGCCAGC,67816110,66480484,1335626,0,0.0187,0.9803,0.0197,0.0000
5,tih_rna_sample_00136_23KMKGLT4_1,CCAATGTTGA-CTTGAATGTC,76137621,74971069,1166552,0,0.0210,0.9847,0.0153,0.0000
5,tih_rna_sample_00453_23KMKGLT4_1,CGTACTTAGA-CCGATGTTCA,53364165,52417449,946716,0,0.0147,0.9823,0.0177,0.0000
5,tih_rna_sample_00457_23KMKGLT4_1,GCCGTGAACA-GCACCACCAT,89933614,87633695,2299919,0,0.0248,0.9744,0.0256,0.0000
5,tih_rna_sample_00462_23KMKGLT4_1,AGGAGACCAC-TACCACGTAG,112862527,110562384,2300143,0,0.0311,0.9796,0.0204,0.0000
5,FFPE_V4_0001_RNA_0001_23KMKGLT4_1,GAAGCAAGCG-TCACCGACTA,89367239,87151632,2215607,0,0.0246,0.9752,0.0248,0.0000
5,tih_rna_sample_00460_23KMKGLT4_1,AACGCGACTG-GACCTACGAG,50367458,49261637,1105821,0,0.0139,0.9780,0.0220,0.0000
5,tih_rna_sample_00141_23KMKGLT4_1,TTCGCGGACT-AGAGAGTGGT,90901632,89145437,1756195,0,0.0251,0.9807,0.0193,0.0000
5,tih_rna_sample_00464_23KMKGLT4_1,TCGTGACGAC-GTGACTAACT,72009092,70751027,1258065,0,0.0198,0.9825,0.0175,0.0000
5,tih_rna_sample_00467_23KMKGLT4_1,TCAATCTAGC-TCCGAATAAG,71384776,70083787,1300989,0,0.0197,0.9818,0.0182,0.0000
5,tih_rna_sample_00473_23KMKGLT4_1,GCGGAGTCAA-CTCTATAGCT,104595860,102299619,2296241,0,0.0288,0.9780,0.0220,0.0000
5,tih_rna_sample_00145_23KMKGLT4_1,GATGCTAGAA-TGGATGCCAG,76599493,75231053,1368440,0,0.0211,0.9821,0.0179,0.0000
5,tih_rna_sample_00146_23KMKGLT4_1,ACGATGGTTA-AATTGCTAGG,98613853,96330315,2283538,0,0.0272,0.9768,0.0232,0.0000
5,tih_rna_sample_00461_23KMKGLT4_1,AGAGCAGTAT-CAAGAGGAGG,127830364,125482543,2347821,0,0.0352,0.9816,0.0184,0.0000
5,tih_rna_sample_00475_23KMKGLT4_1,TTGTGATCCT-ATGAAGGCAT,68537423,67443626,1093797,0,0.0189,0.9840,0.0160,0.0000
5,tih_rna_sample_00476_23KMKGLT4_1,TAAGATCGGA-TTCATCCGTG,65014709,64008893,1005816,0,0.0179,0.9845,0.0155,0.0000
5,FFPE_HD789_02_RNA_0011_23KMKGLT4_1,TTAGTTGCTG-ATGGCGGATT,92802706,91055824,1746882,0,0.0256,0.9812,0.0188,0.0000
5,tih_rna_sample_00149_23KMKGLT4_1,AGTCAGATGC-CTCACACACT,61032991,59708052,1324939,0,0.0168,0.9783,0.0217,0.0000
5,tih_rna_sample_00150_23KMKGLT4_1,AGTACAACTG-CATTGAGTTC,108530804,106814591,1716213,0,0.0299,0.9842,0.0158,0.0000
5,tih_rna_sample_00151_23KMKGLT4_1,CTTAGTACGC-GCTACAACGA,79973932,78393620,1580312,0,0.0220,0.9802,0.0198,0.0000
5,tih_rna_sample_00479_23KMKGLT4_1,GTACGCATCG-GAGTTGTTCA,85877375,83789743,2087632,0,0.0237,0.9757,0.0243,0.0000
5,tih_rna_sample_00153_23KMKGLT4_1,ACTTCCGTTC-CAATTCCGTG,38292123,37613592,678531,0,0.0106,0.9823,0.0177,0.0000
5,tih_rna_sample_00154_23KMKGLT4_1,CCACCTGCTT-TGTTACCGTC,66342876,64764925,1577951,0,0.0183,0.9762,0.0238,0.0000
5,tih_rna_sample_00480_23KMKGLT4_1,TGGTGGTTGT-TACCTGTCAA,105377563,103525779,1851784,0,0.0290,0.9824,0.0176,0.0000
5,tih_rna_sample_00156_23KMKGLT4_1,ACGCAACACA-CATTCAGGAG,6737402,6575722,161680,0,0.0019,0.9760,0.0240,0.0000
5,tih_rna_sample_00157_23KMKGLT4_1,CCAGTGCACT-CCTCCGTATC,95475193,92661647,2813546,0,0.0263,0.9705,0.0295,0.0000
5,tih_rna_sample_00158_23KMKGLT4_1,CATCAGGCGT-CGTGTTACCG,91697248,89605330,2091918,0,0.0253,0.9772,0.0228,0.0000
5,tih_rna_sample_00481_23KMKGLT4_1,ATCCTAGAAC-TGAAGTCTGC,94120351,92555500,1564851,0,0.0259,0.9834,0.0166,0.0000
5,tih_rna_sample_00482_23KMKGLT4_1,GCCTAGAGTC-ATGGTTCTCT,23519230,23133712,385518,0,0.0065,0.9836,0.0164,0.0000
5,tih_rna_sample_00161_23KMKGLT4_1,CTTACTCTCT-CTGCTTAAGG,78157059,76413290,1743769,0,0.0215,0.9777,0.0223,0.0000
5,tih_rna_sample_00300_23KMKGLT4_1,CCGACAACCT-TTCTACCTGT,35549362,34610690,938672,0,0.0098,0.9736,0.0264,0.0000
5,NTC_0001_0001_23KMKGLT4_1,GATCTGTATG-ATCGAAGAGC,749224,733002,16222,0,0.0002,0.9783,0.0217,0.0000
5,tih_rna_sample_00164_23KMKGLT4_1,ATAGGCAGTG-CAGAACTTAG,41335888,40613899,721989,0,0.0114,0.9825,0.0175,0.0000
5,tih_rna_sample_00334_23KMKGLT4_1,GAATAGAGTG-CACAGCGTCT,98828266,97083308,1744958,0,0.0272,0.9823,0.0177,0.0000
5,tih_rna_sample_00338_23KMKGLT4_1,GTAACAGGAA-TGTCTTCAGA,27185335,26604682,580653,0,0.0075,0.9786,0.0214,0.0000
5,tih_rna_sample_00166_23KMKGLT4_1,ATGGTTGTTG-AGTTATGAGG,93032790,91112284,1920506,0,0.0256,0.9794,0.0206,0.0000
5,tih_rna_sample_00339_23KMKGLT4_1,ACAATAGCAC-GTATGCCTAT,87360037,85829668,1530369,0,0.0241,0.9825,0.0175,0.0000
5,tih_rna_sample_00168_23KMKGLT4_1,CTACAAGTTC-GCACCATGAA,68902197,67688837,1213360,0,0.0190,0.9824,0.0176,0.0000
5,tih_rna_sample_00361_23KMKGLT4_1,AACCTGATCT-ATTCCGTCCG,78028752,76363194,1665558,0,0.0215,0.9787,0.0213,0.0000
5,Undetermined,,171826374,171826374,0,0,0.0474,1.0000,0.0000,0.0000