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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001exp0004/B23KMKGLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L005/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp0001R_exp0004_73d51683
Published
Jun 07, 2026 11:26 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
5 tih_rna_sample_00427_23KMKGLT4_1 TTGGATTGTC CGGCTGTTAG 1 10719337339 10093517319 415373144673 38.75 0.94
5 tih_rna_sample_00427_23KMKGLT4_1 TTGGATTGTC CGGCTGTTAG 2 10719337339 10013447310 413921884239 38.61 0.93
5 tih_rna_sample_00430_23KMKGLT4_1 AATTGGCACA CAGTCGGAGT 1 7704379078 7228597636 297745078933 38.65 0.94
5 tih_rna_sample_00430_23KMKGLT4_1 AATTGGCACA CAGTCGGAGT 2 7704379078 7195786792 297453427567 38.61 0.93
5 tih_rna_sample_00129_23KMKGLT4_1 AGGCAATCGC ATGAGTCTGT 1 11260376379 10683256698 438634954176 38.95 0.95
5 tih_rna_sample_00129_23KMKGLT4_1 AGGCAATCGC ATGAGTCTGT 2 11260376379 10528571485 435166214533 38.65 0.94
5 tih_rna_sample_00434_23KMKGLT4_1 TGCAACACTA CGTTCTGGTA 1 10723316340 10124364755 416035978346 38.80 0.94
5 tih_rna_sample_00434_23KMKGLT4_1 TGCAACACTA CGTTCTGGTA 2 10723316340 10045586633 414712899455 38.67 0.94
5 tih_rna_sample_00437_23KMKGLT4_1 GAATCGCCTG CATTGACGGC 1 13963730889 13217883725 543038779697 38.89 0.95
5 tih_rna_sample_00437_23KMKGLT4_1 GAATCGCCTG CATTGACGGC 2 13963730889 12943962241 537108191623 38.46 0.93
5 tih_rna_sample_00440_23KMKGLT4_1 TCGCATGACA TTGGCCAATG 1 6232285665 5757727430 238759059263 38.31 0.92
5 tih_rna_sample_00440_23KMKGLT4_1 TCGCATGACA TTGGCCAATG 2 6232285665 5741447169 238950880635 38.34 0.92
5 tih_rna_sample_00441_23KMKGLT4_1 TCAATACGTG GCTGCTAATA 1 12107067656 11505839096 471579885116 38.95 0.95
5 tih_rna_sample_00441_23KMKGLT4_1 TCAATACGTG GCTGCTAATA 2 12107067656 11362200488 468795256775 38.72 0.94
5 tih_rna_sample_00134_23KMKGLT4_1 ATTCTCCACG TCGATGATCG 1 5133641224 4655913872 194665617806 37.92 0.91
5 tih_rna_sample_00134_23KMKGLT4_1 ATTCTCCACG TCGATGATCG 2 5133641224 4650932244 194926512696 37.97 0.91
5 tih_rna_sample_00450_23KMKGLT4_1 TGTTACAGAG TGTGTACCAG 1 10141519531 9432123204 390139307040 38.47 0.93
5 tih_rna_sample_00450_23KMKGLT4_1 TGTTACAGAG TGTGTACCAG 2 10141519531 9438875858 390916214867 38.55 0.93
5 tih_rna_sample_00451_23KMKGLT4_1 TTACGGACGC ATTGGCCAGC 1 10240232610 9746467947 399731549802 39.04 0.95
5 tih_rna_sample_00451_23KMKGLT4_1 TTACGGACGC ATTGGCCAGC 2 10240232610 9506839782 394280660403 38.50 0.93
5 tih_rna_sample_00136_23KMKGLT4_1 CCAATGTTGA CTTGAATGTC 1 11496780771 10887617780 447041161046 38.88 0.95
5 tih_rna_sample_00136_23KMKGLT4_1 CCAATGTTGA CTTGAATGTC 2 11496780771 10802903650 445432278580 38.74 0.94
5 tih_rna_sample_00453_23KMKGLT4_1 CGTACTTAGA CCGATGTTCA 1 8057988915 7588265734 312042412807 38.72 0.94
5 tih_rna_sample_00453_23KMKGLT4_1 CGTACTTAGA CCGATGTTCA 2 8057988915 7560991066 311922544930 38.71 0.94
5 tih_rna_sample_00457_23KMKGLT4_1 GCCGTGAACA GCACCACCAT 1 13579975714 12879250109 528412127870 38.91 0.95
5 tih_rna_sample_00457_23KMKGLT4_1 GCCGTGAACA GCACCACCAT 2 13579975714 12736142606 525669765476 38.71 0.94
5 tih_rna_sample_00462_23KMKGLT4_1 AGGAGACCAC TACCACGTAG 1 17042241577 16274870466 666281624163 39.10 0.95
5 tih_rna_sample_00462_23KMKGLT4_1 AGGAGACCAC TACCACGTAG 2 17042241577 16011116396 660337373609 38.75 0.94
5 FFPE_V4_0001_RNA_0001_23KMKGLT4_1 GAAGCAAGCG TCACCGACTA 1 13494453089 12829262116 525963003250 38.98 0.95
5 FFPE_V4_0001_RNA_0001_23KMKGLT4_1 GAAGCAAGCG TCACCGACTA 2 13494453089 12615701671 521487116779 38.64 0.93
5 tih_rna_sample_00460_23KMKGLT4_1 AACGCGACTG GACCTACGAG 1 7605486158 7097991636 293401420767 38.58 0.93
5 tih_rna_sample_00460_23KMKGLT4_1 AACGCGACTG GACCTACGAG 2 7605486158 7041591546 292386008274 38.44 0.93
5 tih_rna_sample_00141_23KMKGLT4_1 TTCGCGGACT AGAGAGTGGT 1 13726146432 13107943337 536669459447 39.10 0.95
5 tih_rna_sample_00141_23KMKGLT4_1 TTCGCGGACT AGAGAGTGGT 2 13726146432 12615681519 524858496876 38.24 0.92
5 tih_rna_sample_00464_23KMKGLT4_1 TCGTGACGAC GTGACTAACT 1 10873372892 10365123446 424828613192 39.07 0.95
5 tih_rna_sample_00464_23KMKGLT4_1 TCGTGACGAC GTGACTAACT 2 10873372892 10200211478 420968130878 38.72 0.94
5 tih_rna_sample_00467_23KMKGLT4_1 TCAATCTAGC TCCGAATAAG 1 10779101176 9949256337 413301966189 38.34 0.92
5 tih_rna_sample_00467_23KMKGLT4_1 TCAATCTAGC TCCGAATAAG 2 10779101176 10015316550 415092490560 38.51 0.93
5 tih_rna_sample_00473_23KMKGLT4_1 GCGGAGTCAA CTCTATAGCT 1 15793974860 14917667675 612833711951 38.80 0.94
5 tih_rna_sample_00473_23KMKGLT4_1 GCGGAGTCAA CTCTATAGCT 2 15793974860 14817108330 611442586122 38.71 0.94
5 tih_rna_sample_00145_23KMKGLT4_1 GATGCTAGAA TGGATGCCAG 1 11566523443 10831395869 446845091462 38.63 0.94
5 tih_rna_sample_00145_23KMKGLT4_1 GATGCTAGAA TGGATGCCAG 2 11566523443 10807683763 446818500370 38.63 0.93
5 tih_rna_sample_00146_23KMKGLT4_1 ACGATGGTTA AATTGCTAGG 1 14890691803 14201711760 581261128470 39.04 0.95
5 tih_rna_sample_00146_23KMKGLT4_1 ACGATGGTTA AATTGCTAGG 2 14890691803 14014239943 577441220503 38.78 0.94
5 tih_rna_sample_00461_23KMKGLT4_1 AGAGCAGTAT CAAGAGGAGG 1 19302384964 18593808605 758310817373 39.29 0.96
5 tih_rna_sample_00461_23KMKGLT4_1 AGAGCAGTAT CAAGAGGAGG 2 19302384964 18175834635 748684724724 38.79 0.94
5 tih_rna_sample_00475_23KMKGLT4_1 TTGTGATCCT ATGAAGGCAT 1 10349150873 9893714847 404786454411 39.11 0.96
5 tih_rna_sample_00475_23KMKGLT4_1 TTGTGATCCT ATGAAGGCAT 2 10349150873 9696817191 400266947295 38.68 0.94
5 tih_rna_sample_00476_23KMKGLT4_1 TAAGATCGGA TTCATCCGTG 1 9817221059 9206514320 379327723769 38.64 0.94
5 tih_rna_sample_00476_23KMKGLT4_1 TAAGATCGGA TTCATCCGTG 2 9817221059 9188523136 379566930556 38.66 0.94
5 FFPE_HD789_02_RNA_0011_23KMKGLT4_1 TTAGTTGCTG ATGGCGGATT 1 14013208606 13371455873 547301859503 39.06 0.95
5 FFPE_HD789_02_RNA_0011_23KMKGLT4_1 TTAGTTGCTG ATGGCGGATT 2 14013208606 13162255431 542864032032 38.74 0.94
5 tih_rna_sample_00149_23KMKGLT4_1 AGTCAGATGC CTCACACACT 1 9215981641 8726021317 358666196116 38.92 0.95
5 tih_rna_sample_00149_23KMKGLT4_1 AGTCAGATGC CTCACACACT 2 9215981641 8640849238 356668060306 38.70 0.94
5 tih_rna_sample_00150_23KMKGLT4_1 AGTACAACTG CATTGAGTTC 1 16388151404 15465420647 635915755376 38.80 0.94
5 tih_rna_sample_00150_23KMKGLT4_1 AGTACAACTG CATTGAGTTC 2 16388151404 15407839653 635143056099 38.76 0.94
5 tih_rna_sample_00151_23KMKGLT4_1 CTTAGTACGC GCTACAACGA 1 12076063732 11558791267 472743900310 39.15 0.96
5 tih_rna_sample_00151_23KMKGLT4_1 CTTAGTACGC GCTACAACGA 2 12076063732 11354233217 468061393124 38.76 0.94
5 tih_rna_sample_00479_23KMKGLT4_1 GTACGCATCG GAGTTGTTCA 1 12967483625 12197802552 502294216470 38.73 0.94
5 tih_rna_sample_00479_23KMKGLT4_1 GTACGCATCG GAGTTGTTCA 2 12967483625 12173925107 502231706483 38.73 0.94
5 tih_rna_sample_00153_23KMKGLT4_1 ACTTCCGTTC CAATTCCGTG 1 5782110573 5322804914 221508801653 38.31 0.92
5 tih_rna_sample_00153_23KMKGLT4_1 ACTTCCGTTC CAATTCCGTG 2 5782110573 5358919704 222407971584 38.46 0.93
5 tih_rna_sample_00154_23KMKGLT4_1 CCACCTGCTT TGTTACCGTC 1 10017774276 9574614480 391771707468 39.11 0.96
5 tih_rna_sample_00154_23KMKGLT4_1 CCACCTGCTT TGTTACCGTC 2 10017774276 9222090624 383383790355 38.27 0.92
5 tih_rna_sample_00480_23KMKGLT4_1 TGGTGGTTGT TACCTGTCAA 1 15912012013 15227839405 622981747924 39.15 0.96
5 tih_rna_sample_00480_23KMKGLT4_1 TGGTGGTTGT TACCTGTCAA 2 15912012013 14933628304 616084069621 38.72 0.94
5 tih_rna_sample_00156_23KMKGLT4_1 ACGCAACACA CATTCAGGAG 1 1017347702 897831871 38026000204 37.38 0.88
5 tih_rna_sample_00156_23KMKGLT4_1 ACGCAACACA CATTCAGGAG 2 1017347702 900367631 38209484144 37.56 0.89
5 tih_rna_sample_00157_23KMKGLT4_1 CCAGTGCACT CCTCCGTATC 1 14416754143 13662109738 561290533723 38.93 0.95
5 tih_rna_sample_00157_23KMKGLT4_1 CCAGTGCACT CCTCCGTATC 2 14416754143 13485500146 556976202757 38.63 0.94
5 tih_rna_sample_00158_23KMKGLT4_1 CATCAGGCGT CGTGTTACCG 1 13846284448 13259232238 542271050377 39.16 0.96
5 tih_rna_sample_00158_23KMKGLT4_1 CATCAGGCGT CGTGTTACCG 2 13846284448 12877842119 533394792209 38.52 0.93
5 tih_rna_sample_00481_23KMKGLT4_1 ATCCTAGAAC TGAAGTCTGC 1 14212173001 13644442248 557324774079 39.21 0.96
5 tih_rna_sample_00481_23KMKGLT4_1 ATCCTAGAAC TGAAGTCTGC 2 14212173001 13344031824 550384785018 38.73 0.94
5 tih_rna_sample_00482_23KMKGLT4_1 GCCTAGAGTC ATGGTTCTCT 1 3551403730 3266719824 135811169730 38.24 0.92
5 tih_rna_sample_00482_23KMKGLT4_1 GCCTAGAGTC ATGGTTCTCT 2 3551403730 3271821880 136137547939 38.33 0.92
5 tih_rna_sample_00161_23KMKGLT4_1 CTTACTCTCT CTGCTTAAGG 1 11801715909 11151068539 458713032016 38.87 0.94
5 tih_rna_sample_00161_23KMKGLT4_1 CTTACTCTCT CTGCTTAAGG 2 11801715909 11037075072 456128467386 38.65 0.94
5 tih_rna_sample_00300_23KMKGLT4_1 CCGACAACCT TTCTACCTGT 1 5367953662 4986053119 206711461639 38.51 0.93
5 tih_rna_sample_00300_23KMKGLT4_1 CCGACAACCT TTCTACCTGT 2 5367953662 4880695092 204254800932 38.05 0.91
5 NTC_0001_0001_23KMKGLT4_1 GATCTGTATG ATCGAAGAGC 1 113132824 75168714 3687722079 32.60 0.66
5 NTC_0001_0001_23KMKGLT4_1 GATCTGTATG ATCGAAGAGC 2 113132824 65615436 3537038391 31.26 0.58
5 tih_rna_sample_00164_23KMKGLT4_1 ATAGGCAGTG CAGAACTTAG 1 6241719088 5625355059 235905780495 37.80 0.90
5 tih_rna_sample_00164_23KMKGLT4_1 ATAGGCAGTG CAGAACTTAG 2 6241719088 5728627663 238797123508 38.26 0.92
5 tih_rna_sample_00334_23KMKGLT4_1 GAATAGAGTG CACAGCGTCT 1 14923068166 14168196819 580885184208 38.93 0.95
5 tih_rna_sample_00334_23KMKGLT4_1 GAATAGAGTG CACAGCGTCT 2 14923068166 14012148898 577993656457 38.73 0.94
5 tih_rna_sample_00338_23KMKGLT4_1 GTAACAGGAA TGTCTTCAGA 1 4104985585 3799071595 157593893413 38.39 0.93
5 tih_rna_sample_00338_23KMKGLT4_1 GTAACAGGAA TGTCTTCAGA 2 4104985585 3792830965 157628474479 38.40 0.92
5 tih_rna_sample_00166_23KMKGLT4_1 ATGGTTGTTG AGTTATGAGG 1 14047951290 13278348359 545494544444 38.83 0.95
5 tih_rna_sample_00166_23KMKGLT4_1 ATGGTTGTTG AGTTATGAGG 2 14047951290 13196748974 544214942726 38.74 0.94
5 tih_rna_sample_00339_23KMKGLT4_1 ACAATAGCAC GTATGCCTAT 1 13191365587 12574913090 515323353062 39.07 0.95
5 tih_rna_sample_00339_23KMKGLT4_1 ACAATAGCAC GTATGCCTAT 2 13191365587 12350985969 510046389537 38.67 0.94
5 tih_rna_sample_00168_23KMKGLT4_1 CTACAAGTTC GCACCATGAA 1 10404231747 9778068131 403077815150 38.74 0.94
5 tih_rna_sample_00168_23KMKGLT4_1 CTACAAGTTC GCACCATGAA 2 10404231747 9686002076 401039176451 38.55 0.93
5 tih_rna_sample_00361_23KMKGLT4_1 AACCTGATCT ATTCCGTCCG 1 11782341552 11225778457 460071957466 39.05 0.95
5 tih_rna_sample_00361_23KMKGLT4_1 AACCTGATCT ATTCCGTCCG 2 11782341552 11006152449 455092194438 38.62 0.93
5 Undetermined 1 25945782474 20819507541 923827831314 35.61 0.80
5 Undetermined 2 25945782474 20108920016 900951515264 34.72 0.78
99 rows