File Info

Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001exp0004/B23KMKGLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L003/Reports/Demultiplex_Stats.csv
Size
5.6 KB
Workflow Run
dev_rna_exp0001R_exp0004_73d51683
Published
Jun 07, 2026 11:27 PM

Content

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_1 GCGCGGTTAA-AAGCTATAGC 77365434 74117983 3247451 0 0.0206 0.9580 0.0420 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_2 TTCCTTGAGG-TAAGACAGCA 76490560 73505961 2984599 0 0.0204 0.9610 0.0390 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_3 GAGTCGCTTC-AGCGAAGATT 77204926 74129486 3075440 0 0.0206 0.9602 0.0398 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_4 GTACGCTCAA-ATTGATGGCG 75229965 72514182 2715783 0 0.0201 0.9639 0.0361 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_5 TAGAAGATCG-CGACCAGTGT 79689269 75729201 3960068 0 0.0213 0.9503 0.0497 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_6 AACCTAGTGC-TACAGGTCCT 83099722 80082561 3017161 0 0.0222 0.9637 0.0363 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_7 CGTGTATGTC-GCATCTCTAT 76603488 73948580 2654908 0 0.0204 0.9653 0.0347 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_8 TTCAGATCCA-TGGCATTGGA 65313697 62983592 2330105 0 0.0174 0.9643 0.0357 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_9 CTCACCAGTT-TTGGTGTGTC 92364368 88596592 3767776 0 0.0247 0.9592 0.0408 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_10 ACTAGTAGTC-ACGTACACTC 84774765 81850851 2923914 0 0.0226 0.9655 0.0345 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_11 AATAGACTGC-TCAAGGTCGC 80355904 77294107 3061797 0 0.0214 0.9619 0.0381 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_12 ATGATCAACG-GTATAGCGTC 72815243 70023391 2791852 0 0.0194 0.9617 0.0383 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_13 TAGGAAGCGG-CCAATCCAGG 75555203 72833067 2722136 0 0.0202 0.9640 0.0360 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_14 GCATCCTACT-GACATCGCGA 70597975 67721817 2876158 0 0.0188 0.9593 0.0407 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_15 AGTCCAGCGT-TGTCGTATTG 76067177 73110952 2956225 0 0.0203 0.9611 0.0389 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_16 AGGCAGCCAT-GAGTGTCTAG 72741306 69996194 2745112 0 0.0194 0.9623 0.0377 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_17 GCGACTCGTA-CAGGCCATGT 83547640 78574396 4973244 0 0.0223 0.9405 0.0595 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_18 GTATCTGAGG-ACGTATCTTG 88327990 85297650 3030340 0 0.0236 0.9657 0.0343 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_19 CATCACCTAA-TGGTGGTATT 76441503 72787308 3654195 0 0.0204 0.9522 0.0478 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_20 CGGCATATAC-ATGAGCTGGA 77637678 74709065 2928613 0 0.0207 0.9623 0.0377 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_21 CACGAGTGTC-TAGGCTAGAG 69169568 66861553 2308015 0 0.0185 0.9666 0.0334 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_22 CGGAGACTAT-ATGCTTCTAC 70212701 67262063 2950638 0 0.0187 0.9580 0.0420 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_23 AAGGTGTTAG-TGTGCTGGTG 84900297 81481856 3418441 0 0.0227 0.9597 0.0403 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_24 GCGATGGAAG-GCCGCAAGAT 78991094 75767080 3224014 0 0.0211 0.9592 0.0408 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_25 ACGGTCGCAT-GTACTCTCTA 87945594 84760673 3184921 0 0.0235 0.9638 0.0362 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_26 TTACACACGG-AACTCCGAGA 81627658 78809559 2818099 0 0.0218 0.9655 0.0345 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_27 CGAGATTAGA-CTAATCGCGG 50877862 48480220 2397642 0 0.0136 0.9529 0.0471 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_28 CAAGGATCGA-GCAGACACAA 70869908 68296903 2573005 0 0.0189 0.9637 0.0363 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_29 ACAACACACA-CATCGGCACT 64984414 62579546 2404868 0 0.0173 0.9630 0.0370 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_30 AAGAGCTCGC-CCAATAGATC 65505083 63117591 2387492 0 0.0175 0.9636 0.0364 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_31 ACAGAGGCGT-GACATATCGG 64991770 62573450 2418320 0 0.0173 0.9628 0.0372 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_32 AACTGTACGG-CTCCAATATG 68723165 66134830 2588335 0 0.0183 0.9623 0.0377 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_33 GCGAAGTAGG-ACCATTGTGT 94183075 90871814 3311261 0 0.0251 0.9648 0.0352 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_34 GTGAAGACAC-TGGCTTGATC 76618127 73905658 2712469 0 0.0204 0.9646 0.0354 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_35 GACTTAGGTC-CTATGGACTT 72584294 70062297 2521997 0 0.0194 0.9653 0.0347 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_36 AGGACGGACA-GAAGTCGTGG 59235077 56858191 2376886 0 0.0158 0.9599 0.0401 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_37 CCTATGTGTA-TAGTGAGTCG 84643061 81383712 3259349 0 0.0226 0.9615 0.0385 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_38 CAACGTTGAC-TTGGACGGAA 58952857 56718926 2233931 0 0.0157 0.9621 0.0379 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_39 TGACATAGGT-TACCAGAGAT 76107879 73377091 2730788 0 0.0203 0.9641 0.0359 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_40 TTACACCAAC-ATGAGTTAGG 56119987 54044336 2075651 0 0.0150 0.9630 0.0370 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_41 CCTGGAATTA-CGTCATCGAA 84231024 80277609 3953415 0 0.0225 0.9531 0.0469 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_42 GCAACATCAA-TGACCTAGTT 66319798 63665681 2654117 0 0.0177 0.9600 0.0400 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_43 ACAGCCAGGT-TCATGGTACT 67262636 64775776 2486860 0 0.0180 0.9630 0.0370 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_44 TAGTCCATCT-GACAGGACAG 68513693 65890762 2622931 0 0.0183 0.9617 0.0383 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_45 GCCTCTCAGA-CGTGACGACT 59436532 57170015 2266517 0 0.0159 0.9619 0.0381 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_46 TAGGTTCAAG-ACTTACCGGC 78459710 75764269 2695441 0 0.0209 0.9656 0.0344 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_47 AAGACTCTCG-GCTCTCCTTC 62832002 60196041 2635961 0 0.0168 0.9580 0.0420 0.0000
3 FFPE_V4_0001_RNA_0005_23KMKGLT4_48 GAAGATCGAC-AGTGACCACG 59909944 57641455 2268489 0 0.0160 0.9621 0.0379 0.0000
3 Undetermined 200487374 200487374 0 0 0.0535 1.0000 0.0000 0.0000
50 rows