File Info
- Filename
- Adapter_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001exp0004/B23KMKGLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L003/Reports/Adapter_Metrics.csv
- Size
- 7.7 KB
- Workflow Run
- dev_rna_exp0001R_exp0004_73d51683
- Published
- Jun 07, 2026 11:27 PM
Content
View in new tab| Lane | Sample_ID | index | index2 | ReadNumber | AdapterBases | SampleBases | % Adapter Bases |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_1 | GCGCGGTTAA | AAGCTATAGC | 1 | 0 | 11682180534 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_1 | GCGCGGTTAA | AAGCTATAGC | 2 | 0 | 11682180534 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_2 | TTCCTTGAGG | TAAGACAGCA | 1 | 0 | 11550074560 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_2 | TTCCTTGAGG | TAAGACAGCA | 2 | 0 | 11550074560 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_3 | GAGTCGCTTC | AGCGAAGATT | 1 | 0 | 11657943826 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_3 | GAGTCGCTTC | AGCGAAGATT | 2 | 0 | 11657943826 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_4 | GTACGCTCAA | ATTGATGGCG | 1 | 0 | 11359724715 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_4 | GTACGCTCAA | ATTGATGGCG | 2 | 0 | 11359724715 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_5 | TAGAAGATCG | CGACCAGTGT | 1 | 0 | 12033079619 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_5 | TAGAAGATCG | CGACCAGTGT | 2 | 0 | 12033079619 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_6 | AACCTAGTGC | TACAGGTCCT | 1 | 0 | 12548058022 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_6 | AACCTAGTGC | TACAGGTCCT | 2 | 0 | 12548058022 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_7 | CGTGTATGTC | GCATCTCTAT | 1 | 0 | 11567126688 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_7 | CGTGTATGTC | GCATCTCTAT | 2 | 0 | 11567126688 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_8 | TTCAGATCCA | TGGCATTGGA | 1 | 0 | 9862368247 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_8 | TTCAGATCCA | TGGCATTGGA | 2 | 0 | 9862368247 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_9 | CTCACCAGTT | TTGGTGTGTC | 1 | 0 | 13947019568 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_9 | CTCACCAGTT | TTGGTGTGTC | 2 | 0 | 13947019568 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_10 | ACTAGTAGTC | ACGTACACTC | 1 | 0 | 12800989515 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_10 | ACTAGTAGTC | ACGTACACTC | 2 | 0 | 12800989515 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_11 | AATAGACTGC | TCAAGGTCGC | 1 | 0 | 12133741504 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_11 | AATAGACTGC | TCAAGGTCGC | 2 | 0 | 12133741504 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_12 | ATGATCAACG | GTATAGCGTC | 1 | 0 | 10995101693 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_12 | ATGATCAACG | GTATAGCGTC | 2 | 0 | 10995101693 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_13 | TAGGAAGCGG | CCAATCCAGG | 1 | 0 | 11408835653 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_13 | TAGGAAGCGG | CCAATCCAGG | 2 | 0 | 11408835653 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_14 | GCATCCTACT | GACATCGCGA | 1 | 0 | 10660294225 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_14 | GCATCCTACT | GACATCGCGA | 2 | 0 | 10660294225 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_15 | AGTCCAGCGT | TGTCGTATTG | 1 | 0 | 11486143727 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_15 | AGTCCAGCGT | TGTCGTATTG | 2 | 0 | 11486143727 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_16 | AGGCAGCCAT | GAGTGTCTAG | 1 | 0 | 10983937206 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_16 | AGGCAGCCAT | GAGTGTCTAG | 2 | 0 | 10983937206 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_17 | GCGACTCGTA | CAGGCCATGT | 1 | 0 | 12615693640 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_17 | GCGACTCGTA | CAGGCCATGT | 2 | 0 | 12615693640 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_18 | GTATCTGAGG | ACGTATCTTG | 1 | 0 | 13337526490 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_18 | GTATCTGAGG | ACGTATCTTG | 2 | 0 | 13337526490 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_19 | CATCACCTAA | TGGTGGTATT | 1 | 0 | 11542666953 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_19 | CATCACCTAA | TGGTGGTATT | 2 | 0 | 11542666953 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_20 | CGGCATATAC | ATGAGCTGGA | 1 | 0 | 11723289378 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_20 | CGGCATATAC | ATGAGCTGGA | 2 | 0 | 11723289378 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_21 | CACGAGTGTC | TAGGCTAGAG | 1 | 0 | 10444604768 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_21 | CACGAGTGTC | TAGGCTAGAG | 2 | 0 | 10444604768 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_22 | CGGAGACTAT | ATGCTTCTAC | 1 | 0 | 10602117851 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_22 | CGGAGACTAT | ATGCTTCTAC | 2 | 0 | 10602117851 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_23 | AAGGTGTTAG | TGTGCTGGTG | 1 | 0 | 12819944847 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_23 | AAGGTGTTAG | TGTGCTGGTG | 2 | 0 | 12819944847 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_24 | GCGATGGAAG | GCCGCAAGAT | 1 | 0 | 11927655194 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_24 | GCGATGGAAG | GCCGCAAGAT | 2 | 0 | 11927655194 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_25 | ACGGTCGCAT | GTACTCTCTA | 1 | 0 | 13279784694 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_25 | ACGGTCGCAT | GTACTCTCTA | 2 | 0 | 13279784694 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_26 | TTACACACGG | AACTCCGAGA | 1 | 0 | 12325776358 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_26 | TTACACACGG | AACTCCGAGA | 2 | 0 | 12325776358 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_27 | CGAGATTAGA | CTAATCGCGG | 1 | 0 | 7682557162 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_27 | CGAGATTAGA | CTAATCGCGG | 2 | 0 | 7682557162 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_28 | CAAGGATCGA | GCAGACACAA | 1 | 0 | 10701356108 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_28 | CAAGGATCGA | GCAGACACAA | 2 | 0 | 10701356108 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_29 | ACAACACACA | CATCGGCACT | 1 | 0 | 9812646514 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_29 | ACAACACACA | CATCGGCACT | 2 | 0 | 9812646514 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_30 | AAGAGCTCGC | CCAATAGATC | 1 | 0 | 9891267533 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_30 | AAGAGCTCGC | CCAATAGATC | 2 | 0 | 9891267533 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_31 | ACAGAGGCGT | GACATATCGG | 1 | 0 | 9813757270 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_31 | ACAGAGGCGT | GACATATCGG | 2 | 0 | 9813757270 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_32 | AACTGTACGG | CTCCAATATG | 1 | 0 | 10377197915 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_32 | AACTGTACGG | CTCCAATATG | 2 | 0 | 10377197915 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_33 | GCGAAGTAGG | ACCATTGTGT | 1 | 0 | 14221644325 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_33 | GCGAAGTAGG | ACCATTGTGT | 2 | 0 | 14221644325 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_34 | GTGAAGACAC | TGGCTTGATC | 1 | 0 | 11569337177 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_34 | GTGAAGACAC | TGGCTTGATC | 2 | 0 | 11569337177 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_35 | GACTTAGGTC | CTATGGACTT | 1 | 0 | 10960228394 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_35 | GACTTAGGTC | CTATGGACTT | 2 | 0 | 10960228394 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_36 | AGGACGGACA | GAAGTCGTGG | 1 | 0 | 8944496627 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_36 | AGGACGGACA | GAAGTCGTGG | 2 | 0 | 8944496627 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_37 | CCTATGTGTA | TAGTGAGTCG | 1 | 0 | 12781102211 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_37 | CCTATGTGTA | TAGTGAGTCG | 2 | 0 | 12781102211 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_38 | CAACGTTGAC | TTGGACGGAA | 1 | 0 | 8901881407 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_38 | CAACGTTGAC | TTGGACGGAA | 2 | 0 | 8901881407 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_39 | TGACATAGGT | TACCAGAGAT | 1 | 0 | 11492289729 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_39 | TGACATAGGT | TACCAGAGAT | 2 | 0 | 11492289729 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_40 | TTACACCAAC | ATGAGTTAGG | 1 | 0 | 8474118037 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_40 | TTACACCAAC | ATGAGTTAGG | 2 | 0 | 8474118037 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_41 | CCTGGAATTA | CGTCATCGAA | 1 | 0 | 12718884624 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_41 | CCTGGAATTA | CGTCATCGAA | 2 | 0 | 12718884624 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_42 | GCAACATCAA | TGACCTAGTT | 1 | 0 | 10014289498 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_42 | GCAACATCAA | TGACCTAGTT | 2 | 0 | 10014289498 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_43 | ACAGCCAGGT | TCATGGTACT | 1 | 0 | 10156658036 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_43 | ACAGCCAGGT | TCATGGTACT | 2 | 0 | 10156658036 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_44 | TAGTCCATCT | GACAGGACAG | 1 | 0 | 10345567643 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_44 | TAGTCCATCT | GACAGGACAG | 2 | 0 | 10345567643 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_45 | GCCTCTCAGA | CGTGACGACT | 1 | 0 | 8974916332 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_45 | GCCTCTCAGA | CGTGACGACT | 2 | 0 | 8974916332 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_46 | TAGGTTCAAG | ACTTACCGGC | 1 | 0 | 11847416210 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_46 | TAGGTTCAAG | ACTTACCGGC | 2 | 0 | 11847416210 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_47 | AAGACTCTCG | GCTCTCCTTC | 1 | 0 | 9487632302 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_47 | AAGACTCTCG | GCTCTCCTTC | 2 | 0 | 9487632302 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_48 | GAAGATCGAC | AGTGACCACG | 1 | 0 | 9046401544 | 0.000 |
| 3 | FFPE_V4_0001_RNA_0005_23KMKGLT4_48 | GAAGATCGAC | AGTGACCACG | 2 | 0 | 9046401544 | 0.000 |
| 3 | Undetermined | 1 | 0 | 30273593474 | 0.000 | ||
| 3 | Undetermined | 2 | 0 | 30273593474 | 0.000 |
99 rows