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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001exp0004/B23KMKGLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L006/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp0001R_exp0004_73d51683
Published
Jun 07, 2026 11:28 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
6 tih_rna_sample_00427_23KMKGLT4_1 TTGGATTGTC CGGCTGTTAG 1 11267392594 10639077282 437039446182 38.79 0.94
6 tih_rna_sample_00427_23KMKGLT4_1 TTGGATTGTC CGGCTGTTAG 2 11267392594 10581905680 436245404524 38.72 0.94
6 tih_rna_sample_00430_23KMKGLT4_1 AATTGGCACA CAGTCGGAGT 1 8107279845 7637462958 313920441732 38.72 0.94
6 tih_rna_sample_00430_23KMKGLT4_1 AATTGGCACA CAGTCGGAGT 2 8107279845 7613874073 313868956780 38.71 0.94
6 tih_rna_sample_00129_23KMKGLT4_1 AGGCAATCGC ATGAGTCTGT 1 12048128279 11446175230 469326929740 38.95 0.95
6 tih_rna_sample_00129_23KMKGLT4_1 AGGCAATCGC ATGAGTCTGT 2 12048128279 11338317203 467105721293 38.77 0.94
6 tih_rna_sample_00434_23KMKGLT4_1 TGCAACACTA CGTTCTGGTA 1 11407309043 10806213788 443232232295 38.86 0.95
6 tih_rna_sample_00434_23KMKGLT4_1 TGCAACACTA CGTTCTGGTA 2 11407309043 10742448939 442334898324 38.78 0.94
6 tih_rna_sample_00437_23KMKGLT4_1 GAATCGCCTG CATTGACGGC 1 15011778250 14249381530 584302514563 38.92 0.95
6 tih_rna_sample_00437_23KMKGLT4_1 GAATCGCCTG CATTGACGGC 2 15011778250 14008812129 579330403239 38.59 0.93
6 tih_rna_sample_00440_23KMKGLT4_1 TCGCATGACA TTGGCCAATG 1 6540650315 6059661258 250838176632 38.35 0.93
6 tih_rna_sample_00440_23KMKGLT4_1 TCGCATGACA TTGGCCAATG 2 6540650315 6053798291 251367384239 38.43 0.93
6 tih_rna_sample_00441_23KMKGLT4_1 TCAATACGTG GCTGCTAATA 1 13045838582 12442259769 508938462945 39.01 0.95
6 tih_rna_sample_00441_23KMKGLT4_1 TCAATACGTG GCTGCTAATA 2 13045838582 12319784360 506707229084 38.84 0.94
6 tih_rna_sample_00134_23KMKGLT4_1 ATTCTCCACG TCGATGATCG 1 5394041932 4907009074 204867992758 37.98 0.91
6 tih_rna_sample_00134_23KMKGLT4_1 ATTCTCCACG TCGATGATCG 2 5394041932 4910765955 205321201710 38.06 0.91
6 tih_rna_sample_00450_23KMKGLT4_1 TGTTACAGAG TGTGTACCAG 1 10710088136 9985037769 412369837365 38.50 0.93
6 tih_rna_sample_00450_23KMKGLT4_1 TGTTACAGAG TGTGTACCAG 2 10710088136 9995081922 413374556505 38.60 0.93
6 tih_rna_sample_00451_23KMKGLT4_1 TTACGGACGC ATTGGCCAGC 1 10887580935 10357906573 424650581485 39.00 0.95
6 tih_rna_sample_00451_23KMKGLT4_1 TTACGGACGC ATTGGCCAGC 2 10887580935 10164425200 420361523983 38.61 0.93
6 tih_rna_sample_00136_23KMKGLT4_1 CCAATGTTGA CTTGAATGTC 1 12401073112 11779353959 482706467249 38.92 0.95
6 tih_rna_sample_00136_23KMKGLT4_1 CCAATGTTGA CTTGAATGTC 2 12401073112 11715202701 481739779761 38.85 0.94
6 tih_rna_sample_00453_23KMKGLT4_1 CGTACTTAGA CCGATGTTCA 1 8584528633 8115994391 333089655959 38.80 0.95
6 tih_rna_sample_00453_23KMKGLT4_1 CGTACTTAGA CCGATGTTCA 2 8584528633 8100808646 333255977459 38.82 0.94
6 tih_rna_sample_00457_23KMKGLT4_1 GCCGTGAACA GCACCACCAT 1 14530208748 13833046204 566277354925 38.97 0.95
6 tih_rna_sample_00457_23KMKGLT4_1 GCCGTGAACA GCACCACCAT 2 14530208748 13721626598 564386114891 38.84 0.94
6 tih_rna_sample_00462_23KMKGLT4_1 AGGAGACCAC TACCACGTAG 1 18291592625 17483430807 715037536542 39.09 0.96
6 tih_rna_sample_00462_23KMKGLT4_1 AGGAGACCAC TACCACGTAG 2 18291592625 17292608802 710947945923 38.87 0.95
6 FFPE_V4_0001_RNA_0001_23KMKGLT4_1 GAAGCAAGCG TCACCGACTA 1 14478542890 13835197482 565635978855 39.07 0.96
6 FFPE_V4_0001_RNA_0001_23KMKGLT4_1 GAAGCAAGCG TCACCGACTA 2 14478542890 13642651306 561689871532 38.79 0.94
6 tih_rna_sample_00460_23KMKGLT4_1 AACGCGACTG GACCTACGAG 1 8070971593 7547654525 311492619587 38.59 0.94
6 tih_rna_sample_00460_23KMKGLT4_1 AACGCGACTG GACCTACGAG 2 8070971593 7519993744 311260092943 38.57 0.93
6 tih_rna_sample_00141_23KMKGLT4_1 TTCGCGGACT AGAGAGTGGT 1 14594816665 13952785067 570673152647 39.10 0.96
6 tih_rna_sample_00141_23KMKGLT4_1 TTCGCGGACT AGAGAGTGGT 2 14594816665 13474138590 559134356796 38.31 0.92
6 tih_rna_sample_00464_23KMKGLT4_1 TCGTGACGAC GTGACTAACT 1 11548216807 11013478101 451064788503 39.06 0.95
6 tih_rna_sample_00464_23KMKGLT4_1 TCGTGACGAC GTGACTAACT 2 11548216807 10887735681 448202899521 38.81 0.94
6 tih_rna_sample_00467_23KMKGLT4_1 TCAATCTAGC TCCGAATAAG 1 11399930881 10516858179 436543650735 38.29 0.92
6 tih_rna_sample_00467_23KMKGLT4_1 TCAATCTAGC TCCGAATAAG 2 11399930881 10633413801 439878861675 38.59 0.93
6 tih_rna_sample_00473_23KMKGLT4_1 GCGGAGTCAA CTCTATAGCT 1 16857994095 15994078474 655596981382 38.89 0.95
6 tih_rna_sample_00473_23KMKGLT4_1 GCGGAGTCAA CTCTATAGCT 2 16857994095 15913674910 654630710086 38.83 0.94
6 tih_rna_sample_00145_23KMKGLT4_1 GATGCTAGAA TGGATGCCAG 1 12281210671 11526345891 474742792716 38.66 0.94
6 tih_rna_sample_00145_23KMKGLT4_1 GATGCTAGAA TGGATGCCAG 2 12281210671 11533644576 475618493520 38.73 0.94
6 tih_rna_sample_00146_23KMKGLT4_1 ACGATGGTTA AATTGCTAGG 1 16059204699 15363121098 627659860512 39.08 0.96
6 tih_rna_sample_00146_23KMKGLT4_1 ACGATGGTTA AATTGCTAGG 2 16059204699 15204279416 624599595473 38.89 0.95
6 tih_rna_sample_00461_23KMKGLT4_1 AGAGCAGTAT CAAGAGGAGG 1 20607740855 19873451370 809840379729 39.30 0.96
6 tih_rna_sample_00461_23KMKGLT4_1 AGAGCAGTAT CAAGAGGAGG 2 20607740855 19499030924 801241648034 38.88 0.95
6 tih_rna_sample_00475_23KMKGLT4_1 TTGTGATCCT ATGAAGGCAT 1 11122908093 10642384686 435028989042 39.11 0.96
6 tih_rna_sample_00475_23KMKGLT4_1 TTGTGATCCT ATGAAGGCAT 2 11122908093 10481476006 431432141509 38.79 0.94
6 tih_rna_sample_00476_23KMKGLT4_1 TAAGATCGGA TTCATCCGTG 1 10482853974 9867101535 405703401363 38.70 0.94
6 tih_rna_sample_00476_23KMKGLT4_1 TAAGATCGGA TTCATCCGTG 2 10482853974 9867816898 406472420308 38.77 0.94
6 FFPE_HD789_02_RNA_0011_23KMKGLT4_1 TTAGTTGCTG ATGGCGGATT 1 15343572815 14693876906 600149788067 39.11 0.96
6 FFPE_HD789_02_RNA_0011_23KMKGLT4_1 TTAGTTGCTG ATGGCGGATT 2 15343572815 14514471133 596490035440 38.88 0.95
6 tih_rna_sample_00149_23KMKGLT4_1 AGTCAGATGC CTCACACACT 1 9811888796 9277964965 381349179622 38.87 0.95
6 tih_rna_sample_00149_23KMKGLT4_1 AGTCAGATGC CTCACACACT 2 9811888796 9243016220 380630290823 38.79 0.94
6 tih_rna_sample_00150_23KMKGLT4_1 AGTACAACTG CATTGAGTTC 1 17528811293 16589063015 680836708523 38.84 0.95
6 tih_rna_sample_00150_23KMKGLT4_1 AGTACAACTG CATTGAGTTC 2 17528811293 16566966655 681142762198 38.86 0.95
6 tih_rna_sample_00151_23KMKGLT4_1 CTTAGTACGC GCTACAACGA 1 13006557442 12468790516 509298591505 39.16 0.96
6 tih_rna_sample_00151_23KMKGLT4_1 CTTAGTACGC GCTACAACGA 2 13006557442 12311881679 505818625556 38.89 0.95
6 tih_rna_sample_00479_23KMKGLT4_1 GTACGCATCG GAGTTGTTCA 1 13743082743 12978835378 533231106856 38.80 0.94
6 tih_rna_sample_00479_23KMKGLT4_1 GTACGCATCG GAGTTGTTCA 2 13743082743 12974290082 533731390760 38.84 0.94
6 tih_rna_sample_00153_23KMKGLT4_1 ACTTCCGTTC CAATTCCGTG 1 6104678736 5609551634 233493169493 38.25 0.92
6 tih_rna_sample_00153_23KMKGLT4_1 ACTTCCGTTC CAATTCCGTG 2 6104678736 5676795710 235227818054 38.53 0.93
6 tih_rna_sample_00154_23KMKGLT4_1 CCACCTGCTT TGTTACCGTC 1 10811360212 10345199805 422858777244 39.11 0.96
6 tih_rna_sample_00154_23KMKGLT4_1 CCACCTGCTT TGTTACCGTC 2 10811360212 10006717977 414783073443 38.37 0.93
6 tih_rna_sample_00480_23KMKGLT4_1 TGGTGGTTGT TACCTGTCAA 1 17011490578 16278511535 665734619291 39.13 0.96
6 tih_rna_sample_00480_23KMKGLT4_1 TGGTGGTTGT TACCTGTCAA 2 17011490578 16032147551 660012058817 38.80 0.94
6 tih_rna_sample_00156_23KMKGLT4_1 ACGCAACACA CATTCAGGAG 1 1069194307 947262766 40055193142 37.46 0.89
6 tih_rna_sample_00156_23KMKGLT4_1 ACGCAACACA CATTCAGGAG 2 1069194307 959386745 40442656790 37.83 0.90
6 tih_rna_sample_00157_23KMKGLT4_1 CCAGTGCACT CCTCCGTATC 1 15109869058 14316613471 587843060224 38.90 0.95
6 tih_rna_sample_00157_23KMKGLT4_1 CCAGTGCACT CCTCCGTATC 2 15109869058 14200892712 585159702915 38.73 0.94
6 tih_rna_sample_00158_23KMKGLT4_1 CATCAGGCGT CGTGTTACCG 1 14683375598 14071332755 575014005341 39.16 0.96
6 tih_rna_sample_00158_23KMKGLT4_1 CATCAGGCGT CGTGTTACCG 2 14683375598 13731335306 567171345560 38.63 0.94
6 tih_rna_sample_00481_23KMKGLT4_1 ATCCTAGAAC TGAAGTCTGC 1 15357842617 14764263250 602427504367 39.23 0.96
6 tih_rna_sample_00481_23KMKGLT4_1 ATCCTAGAAC TGAAGTCTGC 2 15357842617 14508275780 596580188126 38.85 0.94
6 tih_rna_sample_00482_23KMKGLT4_1 GCCTAGAGTC ATGGTTCTCT 1 3764365976 3468495121 144006065983 38.26 0.92
6 tih_rna_sample_00482_23KMKGLT4_1 GCCTAGAGTC ATGGTTCTCT 2 3764365976 3487963173 144734818002 38.45 0.93
6 tih_rna_sample_00161_23KMKGLT4_1 CTTACTCTCT CTGCTTAAGG 1 12565309621 11853748913 487691538593 38.81 0.94
6 tih_rna_sample_00161_23KMKGLT4_1 CTTACTCTCT CTGCTTAAGG 2 12565309621 11799283816 486663476932 38.73 0.94
6 tih_rna_sample_00300_23KMKGLT4_1 CCGACAACCT TTCTACCTGT 1 5658635608 5231276987 217174551938 38.38 0.92
6 tih_rna_sample_00300_23KMKGLT4_1 CCGACAACCT TTCTACCTGT 2 5658635608 5166056985 215766493281 38.13 0.91
6 NTC_0001_0001_23KMKGLT4_1 GATCTGTATG ATCGAAGAGC 1 118301101 76387371 3803839890 32.15 0.65
6 NTC_0001_0001_23KMKGLT4_1 GATCTGTATG ATCGAAGAGC 2 118301101 83765775 4048376508 34.22 0.71
6 tih_rna_sample_00164_23KMKGLT4_1 ATAGGCAGTG CAGAACTTAG 1 6575655890 5939325659 248784906401 37.83 0.90
6 tih_rna_sample_00164_23KMKGLT4_1 ATAGGCAGTG CAGAACTTAG 2 6575655890 6054585163 251979994771 38.32 0.92
6 tih_rna_sample_00334_23KMKGLT4_1 GAATAGAGTG CACAGCGTCT 1 16153372678 15406573444 630221376067 39.01 0.95
6 tih_rna_sample_00334_23KMKGLT4_1 GAATAGAGTG CACAGCGTCT 2 16153372678 15272034862 627783331423 38.86 0.95
6 tih_rna_sample_00338_23KMKGLT4_1 GTAACAGGAA TGTCTTCAGA 1 4340925501 4018361859 166553046324 38.37 0.93
6 tih_rna_sample_00338_23KMKGLT4_1 GTAACAGGAA TGTCTTCAGA 2 4340925501 4032916508 167167654445 38.51 0.93
6 tih_rna_sample_00166_23KMKGLT4_1 ATGGTTGTTG AGTTATGAGG 1 14981823776 14188447372 582109023208 38.85 0.95
6 tih_rna_sample_00166_23KMKGLT4_1 ATGGTTGTTG AGTTATGAGG 2 14981823776 14133411549 581575144077 38.82 0.94
6 tih_rna_sample_00339_23KMKGLT4_1 ACAATAGCAC GTATGCCTAT 1 14018645210 13365100073 547352834246 39.04 0.95
6 tih_rna_sample_00339_23KMKGLT4_1 ACAATAGCAC GTATGCCTAT 2 14018645210 13195804046 543484293296 38.77 0.94
6 tih_rna_sample_00168_23KMKGLT4_1 CTACAAGTTC GCACCATGAA 1 11061371667 10408107814 428549770021 38.74 0.94
6 tih_rna_sample_00168_23KMKGLT4_1 CTACAAGTTC GCACCATGAA 2 11061371667 10350075964 427469183872 38.65 0.94
6 tih_rna_sample_00361_23KMKGLT4_1 AACCTGATCT ATTCCGTCCG 1 12640632800 12040706296 493258639606 39.02 0.95
6 tih_rna_sample_00361_23KMKGLT4_1 AACCTGATCT ATTCCGTCCG 2 12640632800 11867071908 489488292516 38.72 0.94
6 Undetermined 1 27806002512 22668122941 997210463194 35.86 0.82
6 Undetermined 2 27806002512 21932149322 974752636679 35.06 0.79
99 rows