Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
7,tih_rna_sample_00427_23KMKGLT4_1,TTGGATTGTC-CGGCTGTTAG,74058665,72545513,1513152,0,0.0192,0.9796,0.0204,0.0000
7,tih_rna_sample_00430_23KMKGLT4_1,AATTGGCACA-CAGTCGGAGT,53446604,52458915,987689,0,0.0139,0.9815,0.0185,0.0000
7,tih_rna_sample_00129_23KMKGLT4_1,AGGCAATCGC-ATGAGTCTGT,79030290,77770920,1259370,0,0.0205,0.9841,0.0159,0.0000
7,tih_rna_sample_00434_23KMKGLT4_1,TGCAACACTA-CGTTCTGGTA,74809762,73399590,1410172,0,0.0194,0.9811,0.0189,0.0000
7,tih_rna_sample_00437_23KMKGLT4_1,GAATCGCCTG-CATTGACGGC,98888889,96733207,2155682,0,0.0257,0.9782,0.0218,0.0000
7,tih_rna_sample_00440_23KMKGLT4_1,TCGCATGACA-TTGGCCAATG,43126385,42262149,864236,0,0.0112,0.9800,0.0200,0.0000
7,tih_rna_sample_00441_23KMKGLT4_1,TCAATACGTG-GCTGCTAATA,85573081,83841997,1731084,0,0.0222,0.9798,0.0202,0.0000
7,tih_rna_sample_00134_23KMKGLT4_1,ATTCTCCACG-TCGATGATCG,35616576,34882078,734498,0,0.0092,0.9794,0.0206,0.0000
7,tih_rna_sample_00450_23KMKGLT4_1,TGTTACAGAG-TGTGTACCAG,70554616,67803246,2751370,0,0.0183,0.9610,0.0390,0.0000
7,tih_rna_sample_00451_23KMKGLT4_1,TTACGGACGC-ATTGGCCAGC,71719508,70347449,1372059,0,0.0186,0.9809,0.0191,0.0000
7,tih_rna_sample_00136_23KMKGLT4_1,CCAATGTTGA-CTTGAATGTC,81271207,80059554,1211653,0,0.0211,0.9851,0.0149,0.0000
7,tih_rna_sample_00453_23KMKGLT4_1,CGTACTTAGA-CCGATGTTCA,56460043,55487317,972726,0,0.0147,0.9828,0.0172,0.0000
7,tih_rna_sample_00457_23KMKGLT4_1,GCCGTGAACA-GCACCACCAT,95577613,93318423,2259190,0,0.0248,0.9764,0.0236,0.0000
7,tih_rna_sample_00462_23KMKGLT4_1,AGGAGACCAC-TACCACGTAG,120088620,117781108,2307512,0,0.0312,0.9808,0.0192,0.0000
7,FFPE_V4_0001_RNA_0001_23KMKGLT4_1,GAAGCAAGCG-TCACCGACTA,95528657,93325829,2202828,0,0.0248,0.9769,0.0231,0.0000
7,tih_rna_sample_00460_23KMKGLT4_1,AACGCGACTG-GACCTACGAG,53165703,52071232,1094471,0,0.0138,0.9794,0.0206,0.0000
7,tih_rna_sample_00141_23KMKGLT4_1,TTCGCGGACT-AGAGAGTGGT,95838731,94043828,1794903,0,0.0249,0.9813,0.0187,0.0000
7,tih_rna_sample_00464_23KMKGLT4_1,TCGTGACGAC-GTGACTAACT,75941380,74664180,1277200,0,0.0197,0.9832,0.0168,0.0000
7,tih_rna_sample_00467_23KMKGLT4_1,TCAATCTAGC-TCCGAATAAG,75030993,73723373,1307620,0,0.0195,0.9826,0.0174,0.0000
7,tih_rna_sample_00473_23KMKGLT4_1,GCGGAGTCAA-CTCTATAGCT,110857378,108603254,2254124,0,0.0288,0.9797,0.0203,0.0000
7,tih_rna_sample_00145_23KMKGLT4_1,GATGCTAGAA-TGGATGCCAG,80933602,79540794,1392808,0,0.0210,0.9828,0.0172,0.0000
7,tih_rna_sample_00146_23KMKGLT4_1,ACGATGGTTA-AATTGCTAGG,105301702,103044044,2257658,0,0.0273,0.9786,0.0214,0.0000
7,tih_rna_sample_00461_23KMKGLT4_1,AGAGCAGTAT-CAAGAGGAGG,135121271,132713036,2408235,0,0.0351,0.9822,0.0178,0.0000
7,tih_rna_sample_00475_23KMKGLT4_1,TTGTGATCCT-ATGAAGGCAT,72876999,71734071,1142928,0,0.0189,0.9843,0.0157,0.0000
7,tih_rna_sample_00476_23KMKGLT4_1,TAAGATCGGA-TTCATCCGTG,68969444,67935719,1033725,0,0.0179,0.9850,0.0150,0.0000
7,FFPE_HD789_02_RNA_0011_23KMKGLT4_1,TTAGTTGCTG-ATGGCGGATT,100157727,98359533,1798194,0,0.0260,0.9820,0.0180,0.0000
7,tih_rna_sample_00149_23KMKGLT4_1,AGTCAGATGC-CTCACACACT,64480948,63145929,1335019,0,0.0167,0.9793,0.0207,0.0000
7,tih_rna_sample_00150_23KMKGLT4_1,AGTACAACTG-CATTGAGTTC,115338130,113531859,1806271,0,0.0300,0.9843,0.0157,0.0000
7,tih_rna_sample_00151_23KMKGLT4_1,CTTAGTACGC-GCTACAACGA,85529546,83958333,1571213,0,0.0222,0.9816,0.0184,0.0000
7,tih_rna_sample_00479_23KMKGLT4_1,GTACGCATCG-GAGTTGTTCA,90644449,88514140,2130309,0,0.0235,0.9765,0.0235,0.0000
7,tih_rna_sample_00153_23KMKGLT4_1,ACTTCCGTTC-CAATTCCGTG,40141237,39449607,691630,0,0.0104,0.9828,0.0172,0.0000
7,tih_rna_sample_00154_23KMKGLT4_1,CCACCTGCTT-TGTTACCGTC,70789620,69199817,1589803,0,0.0184,0.9775,0.0225,0.0000
7,tih_rna_sample_00480_23KMKGLT4_1,TGGTGGTTGT-TACCTGTCAA,111750846,109898614,1852232,0,0.0290,0.9834,0.0166,0.0000
7,tih_rna_sample_00156_23KMKGLT4_1,ACGCAACACA-CATTCAGGAG,7044838,6886225,158613,0,0.0018,0.9775,0.0225,0.0000
7,tih_rna_sample_00157_23KMKGLT4_1,CCAGTGCACT-CCTCCGTATC,99051943,96228242,2823701,0,0.0257,0.9715,0.0285,0.0000
7,tih_rna_sample_00158_23KMKGLT4_1,CATCAGGCGT-CGTGTTACCG,96631461,94518287,2113174,0,0.0251,0.9781,0.0219,0.0000
7,tih_rna_sample_00481_23KMKGLT4_1,ATCCTAGAAC-TGAAGTCTGC,100503640,98875870,1627770,0,0.0261,0.9838,0.0162,0.0000
7,tih_rna_sample_00482_23KMKGLT4_1,GCCTAGAGTC-ATGGTTCTCT,24741959,24337506,404453,0,0.0064,0.9837,0.0163,0.0000
7,tih_rna_sample_00161_23KMKGLT4_1,CTTACTCTCT-CTGCTTAAGG,82202134,80417489,1784645,0,0.0213,0.9783,0.0217,0.0000
7,tih_rna_sample_00300_23KMKGLT4_1,CCGACAACCT-TTCTACCTGT,37110387,36236203,874184,0,0.0096,0.9764,0.0236,0.0000
7,NTC_0001_0001_23KMKGLT4_1,GATCTGTATG-ATCGAAGAGC,784529,767601,16928,0,0.0002,0.9784,0.0216,0.0000
7,tih_rna_sample_00164_23KMKGLT4_1,ATAGGCAGTG-CAGAACTTAG,43316489,42580393,736096,0,0.0112,0.9830,0.0170,0.0000
7,tih_rna_sample_00334_23KMKGLT4_1,GAATAGAGTG-CACAGCGTCT,106116273,104305803,1810470,0,0.0276,0.9829,0.0171,0.0000
7,tih_rna_sample_00338_23KMKGLT4_1,GTAACAGGAA-TGTCTTCAGA,28484141,27915332,568809,0,0.0074,0.9800,0.0200,0.0000
7,tih_rna_sample_00166_23KMKGLT4_1,ATGGTTGTTG-AGTTATGAGG,98325296,96437325,1887971,0,0.0255,0.9808,0.0192,0.0000
7,tih_rna_sample_00339_23KMKGLT4_1,ACAATAGCAC-GTATGCCTAT,92074744,90486609,1588135,0,0.0239,0.9828,0.0172,0.0000
7,tih_rna_sample_00168_23KMKGLT4_1,CTACAAGTTC-GCACCATGAA,72778991,71523500,1255491,0,0.0189,0.9827,0.0173,0.0000
7,tih_rna_sample_00361_23KMKGLT4_1,AACCTGATCT-ATTCCGTCCG,82729059,80997930,1731129,0,0.0215,0.9791,0.0209,0.0000
7,Undetermined,,190151678,190151678,0,0,0.0494,1.0000,0.0000,0.0000