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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001exp0004/B23KMKGLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L007/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp0001R_exp0004_73d51683
Published
Jun 07, 2026 11:29 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
7 tih_rna_sample_00427_23KMKGLT4_1 TTGGATTGTC CGGCTGTTAG 1 11182858415 10552051292 433604558996 38.77 0.94
7 tih_rna_sample_00427_23KMKGLT4_1 TTGGATTGTC CGGCTGTTAG 2 11182858415 10478905565 432430739192 38.67 0.94
7 tih_rna_sample_00430_23KMKGLT4_1 AATTGGCACA CAGTCGGAGT 1 8070437204 7597098533 312368268146 38.71 0.94
7 tih_rna_sample_00430_23KMKGLT4_1 AATTGGCACA CAGTCGGAGT 2 8070437204 7562584496 312055994927 38.67 0.94
7 tih_rna_sample_00129_23KMKGLT4_1 AGGCAATCGC ATGAGTCTGT 1 11933573790 11328505339 464675902333 38.94 0.95
7 tih_rna_sample_00129_23KMKGLT4_1 AGGCAATCGC ATGAGTCTGT 2 11933573790 11202744497 462032303696 38.72 0.94
7 tih_rna_sample_00434_23KMKGLT4_1 TGCAACACTA CGTTCTGGTA 1 11296274062 10693187503 438742196821 38.84 0.95
7 tih_rna_sample_00434_23KMKGLT4_1 TGCAACACTA CGTTCTGGTA 2 11296274062 10614050933 437481986471 38.73 0.94
7 tih_rna_sample_00437_23KMKGLT4_1 GAATCGCCTG CATTGACGGC 1 14932222239 14162756811 580967604981 38.91 0.95
7 tih_rna_sample_00437_23KMKGLT4_1 GAATCGCCTG CATTGACGGC 2 14932222239 13892586497 575302674893 38.53 0.93
7 tih_rna_sample_00440_23KMKGLT4_1 TCGCATGACA TTGGCCAATG 1 6512084135 6028452464 249637866065 38.33 0.93
7 tih_rna_sample_00440_23KMKGLT4_1 TCGCATGACA TTGGCCAATG 2 6512084135 6013122131 249938431481 38.38 0.92
7 tih_rna_sample_00441_23KMKGLT4_1 TCAATACGTG GCTGCTAATA 1 12921535231 12314088423 503880213258 39.00 0.95
7 tih_rna_sample_00441_23KMKGLT4_1 TCAATACGTG GCTGCTAATA 2 12921535231 12172917533 501213764933 38.79 0.94
7 tih_rna_sample_00134_23KMKGLT4_1 ATTCTCCACG TCGATGATCG 1 5378102976 4888527411 204175273308 37.96 0.91
7 tih_rna_sample_00134_23KMKGLT4_1 ATTCTCCACG TCGATGATCG 2 5378102976 4880599908 204353547150 38.00 0.91
7 tih_rna_sample_00450_23KMKGLT4_1 TGTTACAGAG TGTGTACCAG 1 10653747016 9925179253 410042295517 38.49 0.93
7 tih_rna_sample_00450_23KMKGLT4_1 TGTTACAGAG TGTGTACCAG 2 10653747016 9920913777 410701576410 38.55 0.93
7 tih_rna_sample_00451_23KMKGLT4_1 TTACGGACGC ATTGGCCAGC 1 10829645708 10296256323 422252382018 38.99 0.95
7 tih_rna_sample_00451_23KMKGLT4_1 TTACGGACGC ATTGGCCAGC 2 10829645708 10085843592 417561181872 38.56 0.93
7 tih_rna_sample_00136_23KMKGLT4_1 CCAATGTTGA CTTGAATGTC 1 12271952257 11647297955 477473223077 38.91 0.95
7 tih_rna_sample_00136_23KMKGLT4_1 CCAATGTTGA CTTGAATGTC 2 12271952257 11568048315 476151366216 38.80 0.94
7 tih_rna_sample_00453_23KMKGLT4_1 CGTACTTAGA CCGATGTTCA 1 8525466493 8054149891 330666177874 38.79 0.94
7 tih_rna_sample_00453_23KMKGLT4_1 CGTACTTAGA CCGATGTTCA 2 8525466493 8028382357 330579079009 38.78 0.94
7 tih_rna_sample_00457_23KMKGLT4_1 GCCGTGAACA GCACCACCAT 1 14432219563 13729398977 562233551021 38.96 0.95
7 tih_rna_sample_00457_23KMKGLT4_1 GCCGTGAACA GCACCACCAT 2 14432219563 13595009047 559805353999 38.79 0.94
7 tih_rna_sample_00462_23KMKGLT4_1 AGGAGACCAC TACCACGTAG 1 18133381620 17320794324 708613965405 39.08 0.96
7 tih_rna_sample_00462_23KMKGLT4_1 AGGAGACCAC TACCACGTAG 2 18133381620 17104149014 703911380291 38.82 0.94
7 FFPE_V4_0001_RNA_0001_23KMKGLT4_1 GAAGCAAGCG TCACCGACTA 1 14424827207 13772854566 563300030841 39.05 0.95
7 FFPE_V4_0001_RNA_0001_23KMKGLT4_1 GAAGCAAGCG TCACCGACTA 2 14424827207 13554748172 558760475612 38.74 0.94
7 tih_rna_sample_00460_23KMKGLT4_1 AACGCGACTG GACCTACGAG 1 8028021153 7501022564 309694381211 38.58 0.93
7 tih_rna_sample_00460_23KMKGLT4_1 AACGCGACTG GACCTACGAG 2 8028021153 7459854631 309144029176 38.51 0.93
7 tih_rna_sample_00141_23KMKGLT4_1 TTCGCGGACT AGAGAGTGGT 1 14471648381 13828152187 565713293818 39.09 0.96
7 tih_rna_sample_00141_23KMKGLT4_1 TTCGCGGACT AGAGAGTGGT 2 14471648381 13329062863 553672320106 38.26 0.92
7 tih_rna_sample_00464_23KMKGLT4_1 TCGTGACGAC GTGACTAACT 1 11467148380 10929063119 447749656685 39.05 0.95
7 tih_rna_sample_00464_23KMKGLT4_1 TCGTGACGAC GTGACTAACT 2 11467148380 10790096978 444569002139 38.77 0.94
7 tih_rna_sample_00467_23KMKGLT4_1 TCAATCTAGC TCCGAATAAG 1 11329679943 10444455959 433691805056 38.28 0.92
7 tih_rna_sample_00467_23KMKGLT4_1 TCAATCTAGC TCCGAATAAG 2 11329679943 10544902057 436635242971 38.54 0.93
7 tih_rna_sample_00473_23KMKGLT4_1 GCGGAGTCAA CTCTATAGCT 1 16739464078 15868320233 650699387279 38.87 0.95
7 tih_rna_sample_00473_23KMKGLT4_1 GCGGAGTCAA CTCTATAGCT 2 16739464078 15762806222 649141718645 38.78 0.94
7 tih_rna_sample_00145_23KMKGLT4_1 GATGCTAGAA TGGATGCCAG 1 12220973902 11460799524 472223182002 38.64 0.94
7 tih_rna_sample_00145_23KMKGLT4_1 GATGCTAGAA TGGATGCCAG 2 12220973902 11453350120 472742103601 38.68 0.94
7 tih_rna_sample_00146_23KMKGLT4_1 ACGATGGTTA AATTGCTAGG 1 15900557002 15201025102 621235725826 39.07 0.96
7 tih_rna_sample_00146_23KMKGLT4_1 ACGATGGTTA AATTGCTAGG 2 15900557002 15020569388 617669810432 38.85 0.94
7 tih_rna_sample_00461_23KMKGLT4_1 AGAGCAGTAT CAAGAGGAGG 1 20403311921 19665915571 801585242413 39.29 0.96
7 tih_rna_sample_00461_23KMKGLT4_1 AGAGCAGTAT CAAGAGGAGG 2 20403311921 19269543089 792466775726 38.84 0.94
7 tih_rna_sample_00475_23KMKGLT4_1 TTGTGATCCT ATGAAGGCAT 1 11004426849 10523129349 430270392324 39.10 0.96
7 tih_rna_sample_00475_23KMKGLT4_1 TTGTGATCCT ATGAAGGCAT 2 11004426849 10346874848 426315056156 38.74 0.94
7 tih_rna_sample_00476_23KMKGLT4_1 TAAGATCGGA TTCATCCGTG 1 10414386044 9794329064 402870508148 38.68 0.94
7 tih_rna_sample_00476_23KMKGLT4_1 TAAGATCGGA TTCATCCGTG 2 10414386044 9780942468 403304309028 38.73 0.94
7 FFPE_HD789_02_RNA_0011_23KMKGLT4_1 TTAGTTGCTG ATGGCGGATT 1 15123816777 14473309808 591338741465 39.10 0.96
7 FFPE_HD789_02_RNA_0011_23KMKGLT4_1 TTAGTTGCTG ATGGCGGATT 2 15123816777 14272796085 587186771793 38.83 0.94
7 tih_rna_sample_00149_23KMKGLT4_1 AGTCAGATGC CTCACACACT 1 9736623148 9200125111 378279141085 38.85 0.94
7 tih_rna_sample_00149_23KMKGLT4_1 AGTCAGATGC CTCACACACT 2 9736623148 9153800175 377287788918 38.75 0.94
7 tih_rna_sample_00150_23KMKGLT4_1 AGTACAACTG CATTGAGTTC 1 17416057630 16469930003 676186677632 38.83 0.95
7 tih_rna_sample_00150_23KMKGLT4_1 AGTACAACTG CATTGAGTTC 2 17416057630 16425624371 675964176875 38.81 0.94
7 tih_rna_sample_00151_23KMKGLT4_1 CTTAGTACGC GCTACAACGA 1 12914961446 12373805650 505564973881 39.15 0.96
7 tih_rna_sample_00151_23KMKGLT4_1 CTTAGTACGC GCTACAACGA 2 12914961446 12197906881 501635045575 38.84 0.94
7 tih_rna_sample_00479_23KMKGLT4_1 GTACGCATCG GAGTTGTTCA 1 13687311799 12916510968 530856828909 38.78 0.94
7 tih_rna_sample_00479_23KMKGLT4_1 GTACGCATCG GAGTTGTTCA 2 13687311799 12892520782 530902083238 38.79 0.94
7 tih_rna_sample_00153_23KMKGLT4_1 ACTTCCGTTC CAATTCCGTG 1 6061326787 5566214815 231761044873 38.24 0.92
7 tih_rna_sample_00153_23KMKGLT4_1 ACTTCCGTTC CAATTCCGTG 2 6061326787 5624442418 233278465243 38.49 0.93
7 tih_rna_sample_00154_23KMKGLT4_1 CCACCTGCTT TGTTACCGTC 1 10689232620 10223286770 417978234824 39.10 0.96
7 tih_rna_sample_00154_23KMKGLT4_1 CCACCTGCTT TGTTACCGTC 2 10689232620 9868437362 409498883189 38.31 0.92
7 tih_rna_sample_00480_23KMKGLT4_1 TGGTGGTTGT TACCTGTCAA 1 16874377746 16137920825 660170365952 39.12 0.96
7 tih_rna_sample_00480_23KMKGLT4_1 TGGTGGTTGT TACCTGTCAA 2 16874377746 15871468339 653971023688 38.76 0.94
7 tih_rna_sample_00156_23KMKGLT4_1 ACGCAACACA CATTCAGGAG 1 1063770538 941405130 39828241401 37.44 0.88
7 tih_rna_sample_00156_23KMKGLT4_1 ACGCAACACA CATTCAGGAG 2 1063770538 950242606 40142302075 37.74 0.89
7 tih_rna_sample_00157_23KMKGLT4_1 CCAGTGCACT CCTCCGTATC 1 14956843393 14165760733 581769361588 38.90 0.95
7 tih_rna_sample_00157_23KMKGLT4_1 CCAGTGCACT CCTCCGTATC 2 14956843393 14026764137 578530704938 38.68 0.94
7 tih_rna_sample_00158_23KMKGLT4_1 CATCAGGCGT CGTGTTACCG 1 14591350611 13975371465 571247247336 39.15 0.96
7 tih_rna_sample_00158_23KMKGLT4_1 CATCAGGCGT CGTGTTACCG 2 14591350611 13609616308 562799374177 38.57 0.93
7 tih_rna_sample_00481_23KMKGLT4_1 ATCCTAGAAC TGAAGTCTGC 1 15176049640 14580458916 595104763071 39.21 0.96
7 tih_rna_sample_00481_23KMKGLT4_1 ATCCTAGAAC TGAAGTCTGC 2 15176049640 14304502019 588787390940 38.80 0.94
7 tih_rna_sample_00482_23KMKGLT4_1 GCCTAGAGTC ATGGTTCTCT 1 3736035809 3439264911 142854598581 38.24 0.92
7 tih_rna_sample_00482_23KMKGLT4_1 GCCTAGAGTC ATGGTTCTCT 2 3736035809 3452199161 143427581408 38.39 0.92
7 tih_rna_sample_00161_23KMKGLT4_1 CTTACTCTCT CTGCTTAAGG 1 12412522234 11703656043 481635828876 38.80 0.94
7 tih_rna_sample_00161_23KMKGLT4_1 CTTACTCTCT CTGCTTAAGG 2 12412522234 11631916369 480192484645 38.69 0.94
7 tih_rna_sample_00300_23KMKGLT4_1 CCGACAACCT TTCTACCTGT 1 5603668437 5178104738 215019114017 38.37 0.92
7 tih_rna_sample_00300_23KMKGLT4_1 CCGACAACCT TTCTACCTGT 2 5603668437 5099789416 213298429522 38.06 0.91
7 NTC_0001_0001_23KMKGLT4_1 GATCTGTATG ATCGAAGAGC 1 118463879 76452881 3807933113 32.14 0.65
7 NTC_0001_0001_23KMKGLT4_1 GATCTGTATG ATCGAAGAGC 2 118463879 81285283 3995934679 33.73 0.69
7 tih_rna_sample_00164_23KMKGLT4_1 ATAGGCAGTG CAGAACTTAG 1 6540789839 5903003517 247355706300 37.82 0.90
7 tih_rna_sample_00164_23KMKGLT4_1 ATAGGCAGTG CAGAACTTAG 2 6540789839 6006047593 250261904470 38.26 0.92
7 tih_rna_sample_00334_23KMKGLT4_1 GAATAGAGTG CACAGCGTCT 1 16023557223 15270690560 624893272124 39.00 0.95
7 tih_rna_sample_00334_23KMKGLT4_1 GAATAGAGTG CACAGCGTCT 2 16023557223 15113737442 621930411569 38.81 0.94
7 tih_rna_sample_00338_23KMKGLT4_1 GTAACAGGAA TGTCTTCAGA 1 4301105291 3977687606 164942118038 38.35 0.92
7 tih_rna_sample_00338_23KMKGLT4_1 GTAACAGGAA TGTCTTCAGA 2 4301105291 3985491887 165393404243 38.45 0.93
7 tih_rna_sample_00166_23KMKGLT4_1 ATGGTTGTTG AGTTATGAGG 1 14847119696 14052285970 576687879616 38.84 0.95
7 tih_rna_sample_00166_23KMKGLT4_1 ATGGTTGTTG AGTTATGAGG 2 14847119696 13979357850 575734829979 38.78 0.94
7 tih_rna_sample_00339_23KMKGLT4_1 ACAATAGCAC GTATGCCTAT 1 13903286344 13246468456 542664437947 39.03 0.95
7 tih_rna_sample_00339_23KMKGLT4_1 ACAATAGCAC GTATGCCTAT 2 13903286344 13057090816 538319461132 38.72 0.94
7 tih_rna_sample_00168_23KMKGLT4_1 CTACAAGTTC GCACCATGAA 1 10989627641 10332609579 425599383066 38.73 0.94
7 tih_rna_sample_00168_23KMKGLT4_1 CTACAAGTTC GCACCATGAA 2 10989627641 10260105627 424170459828 38.60 0.93
7 tih_rna_sample_00361_23KMKGLT4_1 AACCTGATCT ATTCCGTCCG 1 12492087909 11892858565 487330246309 39.01 0.95
7 tih_rna_sample_00361_23KMKGLT4_1 AACCTGATCT ATTCCGTCCG 2 12492087909 11701925810 483144931511 38.68 0.94
7 Undetermined 1 28712903378 23580808564 1033380586783 35.99 0.82
7 Undetermined 2 28712903378 22680832610 1007382317183 35.08 0.79
99 rows