File Info

Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001exp0004/B23KMKGLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L001/Reports/Demultiplex_Stats.csv
Size
5.6 KB
Workflow Run
dev_rna_exp0001R_exp0004_73d51683
Published
Jun 07, 2026 11:37 PM

Content

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_1 GCGCGGTTAA-AAGCTATAGC 82476633 80907928 1568705 0 0.0206 0.9810 0.0190 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_2 TTCCTTGAGG-TAAGACAGCA 82119360 80660068 1459292 0 0.0205 0.9822 0.0178 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_3 GAGTCGCTTC-AGCGAAGATT 82869573 81197875 1671698 0 0.0207 0.9798 0.0202 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_4 GTACGCTCAA-ATTGATGGCG 80683393 79382465 1300928 0 0.0201 0.9839 0.0161 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_5 TAGAAGATCG-CGACCAGTGT 84171685 81858682 2313003 0 0.0210 0.9725 0.0275 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_6 AACCTAGTGC-TACAGGTCCT 88426511 87061295 1365216 0 0.0221 0.9846 0.0154 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_7 CGTGTATGTC-GCATCTCTAT 81934142 80764135 1170007 0 0.0205 0.9857 0.0143 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_8 TTCAGATCCA-TGGCATTGGA 69637037 68584633 1052404 0 0.0174 0.9849 0.0151 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_9 CTCACCAGTT-TTGGTGTGTC 97722018 95790301 1931717 0 0.0244 0.9802 0.0198 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_10 ACTAGTAGTC-ACGTACACTC 90406672 89127008 1279664 0 0.0226 0.9858 0.0142 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_11 AATAGACTGC-TCAAGGTCGC 85200389 83703422 1496967 0 0.0213 0.9824 0.0176 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_12 ATGATCAACG-GTATAGCGTC 78391783 77060748 1331035 0 0.0196 0.9830 0.0170 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_13 TAGGAAGCGG-CCAATCCAGG 80973780 79706344 1267436 0 0.0202 0.9843 0.0157 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_14 GCATCCTACT-GACATCGCGA 74832911 73371497 1461414 0 0.0187 0.9805 0.0195 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_15 AGTCCAGCGT-TGTCGTATTG 80033963 78568671 1465292 0 0.0200 0.9817 0.0183 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_16 AGGCAGCCAT-GAGTGTCTAG 76932408 75665822 1266586 0 0.0192 0.9835 0.0165 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_17 GCGACTCGTA-CAGGCCATGT 89495848 86573116 2922732 0 0.0223 0.9673 0.0327 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_18 GTATCTGAGG-ACGTATCTTG 94570132 93244176 1325956 0 0.0236 0.9860 0.0140 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_19 CATCACCTAA-TGGTGGTATT 81222169 78965511 2256658 0 0.0203 0.9722 0.0278 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_20 CGGCATATAC-ATGAGCTGGA 82086693 80725236 1361457 0 0.0205 0.9834 0.0166 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_21 CACGAGTGTC-TAGGCTAGAG 73853701 72874662 979039 0 0.0184 0.9867 0.0133 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_22 CGGAGACTAT-ATGCTTCTAC 74816144 73320249 1495895 0 0.0187 0.9800 0.0200 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_23 AAGGTGTTAG-TGTGCTGGTG 90314476 88483093 1831383 0 0.0226 0.9797 0.0203 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_24 GCGATGGAAG-GCCGCAAGAT 84180396 82568609 1611787 0 0.0210 0.9809 0.0191 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_25 ACGGTCGCAT-GTACTCTCTA 93871335 92470534 1400801 0 0.0234 0.9851 0.0149 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_26 TTACACACGG-AACTCCGAGA 87763696 86466291 1297405 0 0.0219 0.9852 0.0148 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_27 CGAGATTAGA-CTAATCGCGG 54671720 53366457 1305263 0 0.0137 0.9761 0.0239 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_28 CAAGGATCGA-GCAGACACAA 75793904 74645663 1148241 0 0.0189 0.9849 0.0151 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_29 ACAACACACA-CATCGGCACT 69448907 68370883 1078024 0 0.0173 0.9845 0.0155 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_30 AAGAGCTCGC-CCAATAGATC 69604902 68506109 1098793 0 0.0174 0.9842 0.0158 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_31 ACAGAGGCGT-GACATATCGG 69270301 68145770 1124531 0 0.0173 0.9838 0.0162 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_32 AACTGTACGG-CTCCAATATG 73323685 72074848 1248837 0 0.0183 0.9830 0.0170 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_33 GCGAAGTAGG-ACCATTGTGT 101255100 99719679 1535421 0 0.0253 0.9848 0.0152 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_34 GTGAAGACAC-TGGCTTGATC 81909779 80704743 1205036 0 0.0205 0.9853 0.0147 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_35 GACTTAGGTC-CTATGGACTT 77575460 76532686 1042774 0 0.0194 0.9866 0.0134 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_36 AGGACGGACA-GAAGTCGTGG 62697675 61492703 1204972 0 0.0157 0.9808 0.0192 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_37 CCTATGTGTA-TAGTGAGTCG 89617861 88047023 1570838 0 0.0224 0.9825 0.0175 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_38 CAACGTTGAC-TTGGACGGAA 62981822 61861271 1120551 0 0.0157 0.9822 0.0178 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_39 TGACATAGGT-TACCAGAGAT 81031454 79780244 1251210 0 0.0202 0.9846 0.0154 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_40 TTACACCAAC-ATGAGTTAGG 60184206 59258953 925253 0 0.0150 0.9846 0.0154 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_41 CCTGGAATTA-CGTCATCGAA 90545865 88326267 2219598 0 0.0226 0.9755 0.0245 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_42 GCAACATCAA-TGACCTAGTT 71301300 69990863 1310437 0 0.0178 0.9816 0.0184 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_43 ACAGCCAGGT-TCATGGTACT 71786332 70638380 1147952 0 0.0179 0.9840 0.0160 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_44 TAGTCCATCT-GACAGGACAG 72834636 71589439 1245197 0 0.0182 0.9829 0.0171 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_45 GCCTCTCAGA-CGTGACGACT 63593950 62462789 1131161 0 0.0159 0.9822 0.0178 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_46 TAGGTTCAAG-ACTTACCGGC 83848541 82663146 1185395 0 0.0209 0.9859 0.0141 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_47 AAGACTCTCG-GCTCTCCTTC 67124169 65768739 1355430 0 0.0168 0.9798 0.0202 0.0000
1 FFPE_V4_0001_RNA_0005_23KMKGLT4_48 GAAGATCGAC-AGTGACCACG 63849001 62751281 1097720 0 0.0159 0.9828 0.0172 0.0000
1 Undetermined 221059769 221059769 0 0 0.0552 1.0000 0.0000 0.0000
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