File Info

Filename
Quality_Metrics.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001exp0004/B23KMKGLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L002/Reports/Quality_Metrics.csv
Size
10.4 KB
Workflow Run
dev_rna_exp0001R_exp0004_73d51683
Published
Jun 07, 2026 11:39 PM

Content

View in new tab
Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_1 GCGCGGTTAA AAGCTATAGC 1 11828579413 11164166444 458508426266 38.76 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_1 GCGCGGTTAA AAGCTATAGC 2 11828579413 11069133444 456896840862 38.63 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_2 TTCCTTGAGG TAAGACAGCA 1 11732547641 11104688741 455772677045 38.85 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_2 TTCCTTGAGG TAAGACAGCA 2 11732547641 10978100815 453156159346 38.62 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_3 GAGTCGCTTC AGCGAAGATT 1 11900881988 11271438983 462503335148 38.86 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_3 GAGTCGCTTC AGCGAAGATT 2 11900881988 11035950370 457377905962 38.43 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_4 GTACGCTCAA ATTGATGGCG 1 11593944137 10903314432 448243499238 38.66 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_4 GTACGCTCAA ATTGATGGCG 2 11593944137 10812906524 447018097853 38.56 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_5 TAGAAGATCG CGACCAGTGT 1 12052300107 11378991056 467073371162 38.75 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_5 TAGAAGATCG CGACCAGTGT 2 12052300107 11234246091 464432099844 38.53 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_6 AACCTAGTGC TACAGGTCCT 1 12695753991 12063984753 494492140557 38.95 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_6 AACCTAGTGC TACAGGTCCT 2 12695753991 11873061937 490131979996 38.61 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_7 CGTGTATGTC GCATCTCTAT 1 11758035686 11085277321 455487055213 38.74 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_7 CGTGTATGTC GCATCTCTAT 2 11758035686 11009186617 454215422683 38.63 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_8 TTCAGATCCA TGGCATTGGA 1 10016153291 9430595277 387516739482 38.69 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_8 TTCAGATCCA TGGCATTGGA 2 10016153291 9324736562 385702234664 38.51 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_9 CTCACCAGTT TTGGTGTGTC 1 14043962625 13358562365 546876878618 38.94 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_9 CTCACCAGTT TTGGTGTGTC 2 14043962625 13168036137 542865890001 38.65 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_10 ACTAGTAGTC ACGTACACTC 1 13066027433 12383737349 507631421513 38.85 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_10 ACTAGTAGTC ACGTACACTC 2 13066027433 11996188536 499206806220 38.21 0.92
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_11 AATAGACTGC TCAAGGTCGC 1 12245020652 11674325248 477688325941 39.01 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_11 AATAGACTGC TCAAGGTCGC 2 12245020652 11438296258 472386307486 38.58 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_12 ATGATCAACG GTATAGCGTC 1 11214273512 10606623089 435104769134 38.80 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_12 ATGATCAACG GTATAGCGTC 2 11214273512 10293349978 427824493837 38.15 0.92
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_13 TAGGAAGCGG CCAATCCAGG 1 11614817018 11024876017 451623578908 38.88 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_13 TAGGAAGCGG CCAATCCAGG 2 11614817018 10900061111 449247878627 38.68 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_14 GCATCCTACT GACATCGCGA 1 10780781353 10171876744 417795269824 38.75 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_14 GCATCCTACT GACATCGCGA 2 10780781353 10050628957 415428447199 38.53 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_15 AGTCCAGCGT TGTCGTATTG 1 11508450202 11005014792 449850779259 39.09 0.96
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_15 AGTCCAGCGT TGTCGTATTG 2 11508450202 10788555275 444794539550 38.65 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_16 AGGCAGCCAT GAGTGTCTAG 1 11093662715 10574366922 432802187397 39.01 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_16 AGGCAGCCAT GAGTGTCTAG 2 11093662715 10391699472 428559520485 38.63 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_17 GCGACTCGTA CAGGCCATGT 1 12792404863 12117261313 496810463992 38.84 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_17 GCGACTCGTA CAGGCCATGT 2 12792404863 11962757254 493865166091 38.61 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_18 GTATCTGAGG ACGTATCTTG 1 13503221508 12817384211 525371843888 38.91 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_18 GTATCTGAGG ACGTATCTTG 2 13503221508 12652017975 521776798392 38.64 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_19 CATCACCTAA TGGTGGTATT 1 11676909426 11057619504 453317398668 38.82 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_19 CATCACCTAA TGGTGGTATT 2 11676909426 10925195648 450835062734 38.61 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_20 CGGCATATAC ATGAGCTGGA 1 11895466373 11322789716 463612586549 38.97 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_20 CGGCATATAC ATGAGCTGGA 2 11895466373 11114559113 458912543297 38.58 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_21 CACGAGTGTC TAGGCTAGAG 1 10608358530 10026874586 411442380446 38.78 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_21 CACGAGTGTC TAGGCTAGAG 2 10608358530 9937252349 409840364867 38.63 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_22 CGGAGACTAT ATGCTTCTAC 1 10787101760 10319508915 421727613831 39.10 0.96
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_22 CGGAGACTAT ATGCTTCTAC 2 10787101760 10109979936 416869908408 38.65 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_23 AAGGTGTTAG TGTGCTGGTG 1 12944813089 12400113865 506335097734 39.11 0.96
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_23 AAGGTGTTAG TGTGCTGGTG 2 12944813089 12144561320 500617544894 38.67 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_24 GCGATGGAAG GCCGCAAGAT 1 12061556860 11543218410 471628784607 39.10 0.96
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_24 GCGATGGAAG GCCGCAAGAT 2 12061556860 11308265769 466265798580 38.66 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_25 ACGGTCGCAT GTACTCTCTA 1 13448839009 12881927813 526129884821 39.12 0.96
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_25 ACGGTCGCAT GTACTCTCTA 2 13448839009 12601854708 519639398190 38.64 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_26 TTACACACGG AACTCCGAGA 1 12546571125 11936909900 488496812963 38.93 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_26 TTACACACGG AACTCCGAGA 2 12546571125 11753905777 484800028444 38.64 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_27 CGAGATTAGA CTAATCGCGG 1 7869789461 7464039172 305768800723 38.85 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_27 CGAGATTAGA CTAATCGCGG 2 7869789461 7354364656 303763017301 38.60 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_28 CAAGGATCGA GCAGACACAA 1 10842084786 10272691373 421058904218 38.84 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_28 CAAGGATCGA GCAGACACAA 2 10842084786 10157587735 418952996419 38.64 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_29 ACAACACACA CATCGGCACT 1 9972543585 9437197070 386940464627 38.80 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_29 ACAACACACA CATCGGCACT 2 9972543585 9320068800 384827923425 38.59 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_30 AAGAGCTCGC CCAATAGATC 1 9969487496 9478257279 388399480815 38.96 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_30 AAGAGCTCGC CCAATAGATC 2 9969487496 9296173315 384298076341 38.55 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_31 ACAGAGGCGT GACATATCGG 1 9953598823 9522486493 389101108717 39.09 0.96
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_31 ACAGAGGCGT GACATATCGG 2 9953598823 9316720421 384377714870 38.62 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_32 AACTGTACGG CTCCAATATG 1 10523696303 9958649888 408446843414 38.81 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_32 AACTGTACGG CTCCAATATG 2 10523696303 9862439543 406665742412 38.64 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_33 GCGAAGTAGG ACCATTGTGT 1 14460937196 13677983632 561057914368 38.80 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_33 GCGAAGTAGG ACCATTGTGT 2 14460937196 13533645815 558506051276 38.62 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_34 GTGAAGACAC TGGCTTGATC 1 11767683680 11201768668 458594220019 38.97 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_34 GTGAAGACAC TGGCTTGATC 2 11767683680 11005786150 454279578568 38.60 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_35 GACTTAGGTC CTATGGACTT 1 11137454376 10555956825 432958477695 38.87 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_35 GACTTAGGTC CTATGGACTT 2 11137454376 10426245829 430216697905 38.63 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_36 AGGACGGACA GAAGTCGTGG 1 9016842086 8517510454 349582705603 38.77 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_36 AGGACGGACA GAAGTCGTGG 2 9016842086 8412927713 347575546112 38.55 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_37 CCTATGTGTA TAGTGAGTCG 1 12870515804 12113962164 497774760684 38.68 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_37 CCTATGTGTA TAGTGAGTCG 2 12870515804 12018268918 496357447096 38.57 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_38 CAACGTTGAC TTGGACGGAA 1 9075159343 8648994602 354016801463 39.01 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_38 CAACGTTGAC TTGGACGGAA 2 9075159343 8480881457 350137169399 38.58 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_39 TGACATAGGT TACCAGAGAT 1 11596067650 11040927492 451996683069 38.98 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_39 TGACATAGGT TACCAGAGAT 2 11596067650 10851804344 447733658282 38.61 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_40 TTACACCAAC ATGAGTTAGG 1 8654549447 8228467180 337005067978 38.94 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_40 TTACACCAAC ATGAGTTAGG 2 8654549447 8096210758 334101955780 38.60 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_41 CCTGGAATTA CGTCATCGAA 1 13004701350 12346776096 505751633013 38.89 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_41 CCTGGAATTA CGTCATCGAA 2 13004701350 12190079318 502633605512 38.65 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_42 GCAACATCAA TGACCTAGTT 1 10257547478 9715226605 398237135134 38.82 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_42 GCAACATCAA TGACCTAGTT 2 10257547478 9591355653 395951233059 38.60 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_43 ACAGCCAGGT TCATGGTACT 1 10320895451 9810156388 401957406868 38.95 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_43 ACAGCCAGGT TCATGGTACT 2 10320895451 9657460134 398491876665 38.61 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_44 TAGTCCATCT GACAGGACAG 1 10458035010 9955267197 407528413257 38.97 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_44 TAGTCCATCT GACAGGACAG 2 10458035010 9788729007 403860063765 38.62 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_45 GCCTCTCAGA CGTGACGACT 1 9133972635 8602161019 353386586068 38.69 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_45 GCCTCTCAGA CGTGACGACT 2 9133972635 8515398365 352017012899 38.54 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_46 TAGGTTCAAG ACTTACCGGC 1 11999826701 11316952103 465046799201 38.75 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_46 TAGGTTCAAG ACTTACCGGC 2 11999826701 10942160472 456294659379 38.03 0.91
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_47 AAGACTCTCG GCTCTCCTTC 1 9643277817 9089583834 373394340096 38.72 0.94
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_47 AAGACTCTCG GCTCTCCTTC 2 9643277817 8996408848 371719853605 38.55 0.93
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_48 GAAGATCGAC AGTGACCACG 1 9170431132 8736357253 357691552132 39.00 0.95
2 FFPE_V4_0001_RNA_0005_23KMKGLT4_48 GAAGATCGAC AGTGACCACG 2 9170431132 8487363841 352043099530 38.39 0.93
2 Undetermined 1 34052533215 28810228312 1243776825949 36.53 0.85
2 Undetermined 2 34052533215 28026772392 1220786928819 35.85 0.82
99 rows