Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
8,tih_rna_sample_00427_23KMKGLT4_1,TTGGATTGTC-CGGCTGTTAG,76349089,74982075,1367014,0,0.0192,0.9821,0.0179,0.0000
8,tih_rna_sample_00430_23KMKGLT4_1,AATTGGCACA-CAGTCGGAGT,54916449,53999654,916795,0,0.0138,0.9833,0.0167,0.0000
8,tih_rna_sample_00129_23KMKGLT4_1,AGGCAATCGC-ATGAGTCTGT,81077524,79896260,1181264,0,0.0204,0.9854,0.0146,0.0000
8,tih_rna_sample_00434_23KMKGLT4_1,TGCAACACTA-CGTTCTGGTA,77356074,76076514,1279560,0,0.0195,0.9835,0.0165,0.0000
8,tih_rna_sample_00437_23KMKGLT4_1,GAATCGCCTG-CATTGACGGC,101911395,99998314,1913081,0,0.0256,0.9812,0.0188,0.0000
8,tih_rna_sample_00440_23KMKGLT4_1,TCGCATGACA-TTGGCCAATG,44066868,43264857,802011,0,0.0111,0.9818,0.0182,0.0000
8,tih_rna_sample_00441_23KMKGLT4_1,TCAATACGTG-GCTGCTAATA,88660568,87103043,1557525,0,0.0223,0.9824,0.0176,0.0000
8,tih_rna_sample_00134_23KMKGLT4_1,ATTCTCCACG-TCGATGATCG,36343221,35674895,668326,0,0.0091,0.9816,0.0184,0.0000
8,tih_rna_sample_00450_23KMKGLT4_1,TGTTACAGAG-TGTGTACCAG,72613081,70243988,2369093,0,0.0183,0.9674,0.0326,0.0000
8,tih_rna_sample_00451_23KMKGLT4_1,TTACGGACGC-ATTGGCCAGC,73334538,72047476,1287062,0,0.0185,0.9824,0.0176,0.0000
8,tih_rna_sample_00136_23KMKGLT4_1,CCAATGTTGA-CTTGAATGTC,83450268,82332110,1118158,0,0.0210,0.9866,0.0134,0.0000
8,tih_rna_sample_00453_23KMKGLT4_1,CGTACTTAGA-CCGATGTTCA,58202553,57304229,898324,0,0.0146,0.9846,0.0154,0.0000
8,tih_rna_sample_00457_23KMKGLT4_1,GCCGTGAACA-GCACCACCAT,99424267,97330838,2093429,0,0.0250,0.9789,0.0211,0.0000
8,tih_rna_sample_00462_23KMKGLT4_1,AGGAGACCAC-TACCACGTAG,123546605,121463493,2083112,0,0.0311,0.9831,0.0169,0.0000
8,FFPE_V4_0001_RNA_0001_23KMKGLT4_1,GAAGCAAGCG-TCACCGACTA,99634409,97626740,2007669,0,0.0251,0.9798,0.0202,0.0000
8,tih_rna_sample_00460_23KMKGLT4_1,AACGCGACTG-GACCTACGAG,54755758,53761337,994421,0,0.0138,0.9818,0.0182,0.0000
8,tih_rna_sample_00141_23KMKGLT4_1,TTCGCGGACT-AGAGAGTGGT,99901266,98243086,1658180,0,0.0251,0.9834,0.0166,0.0000
8,tih_rna_sample_00464_23KMKGLT4_1,TCGTGACGAC-GTGACTAACT,77928518,76753340,1175178,0,0.0196,0.9849,0.0151,0.0000
8,tih_rna_sample_00467_23KMKGLT4_1,TCAATCTAGC-TCCGAATAAG,76432512,75225560,1206952,0,0.0192,0.9842,0.0158,0.0000
8,tih_rna_sample_00473_23KMKGLT4_1,GCGGAGTCAA-CTCTATAGCT,114386064,112356390,2029674,0,0.0288,0.9823,0.0177,0.0000
8,tih_rna_sample_00145_23KMKGLT4_1,GATGCTAGAA-TGGATGCCAG,83104118,81827451,1276667,0,0.0209,0.9846,0.0154,0.0000
8,tih_rna_sample_00146_23KMKGLT4_1,ACGATGGTTA-AATTGCTAGG,109076202,107040147,2036055,0,0.0274,0.9813,0.0187,0.0000
8,tih_rna_sample_00461_23KMKGLT4_1,AGAGCAGTAT-CAAGAGGAGG,139970783,137779817,2190966,0,0.0352,0.9843,0.0157,0.0000
8,tih_rna_sample_00475_23KMKGLT4_1,TTGTGATCCT-ATGAAGGCAT,75514253,74467113,1047140,0,0.0190,0.9861,0.0139,0.0000
8,tih_rna_sample_00476_23KMKGLT4_1,TAAGATCGGA-TTCATCCGTG,70795611,69837981,957630,0,0.0178,0.9865,0.0135,0.0000
8,FFPE_HD789_02_RNA_0011_23KMKGLT4_1,TTAGTTGCTG-ATGGCGGATT,103735584,102102469,1633115,0,0.0261,0.9843,0.0157,0.0000
8,tih_rna_sample_00149_23KMKGLT4_1,AGTCAGATGC-CTCACACACT,65846135,64648636,1197499,0,0.0166,0.9818,0.0182,0.0000
8,tih_rna_sample_00150_23KMKGLT4_1,AGTACAACTG-CATTGAGTTC,119172379,117506579,1665800,0,0.0300,0.9860,0.0140,0.0000
8,tih_rna_sample_00151_23KMKGLT4_1,CTTAGTACGC-GCTACAACGA,88657970,87186126,1471844,0,0.0223,0.9834,0.0166,0.0000
8,tih_rna_sample_00479_23KMKGLT4_1,GTACGCATCG-GAGTTGTTCA,93638498,91690621,1947877,0,0.0236,0.9792,0.0208,0.0000
8,tih_rna_sample_00153_23KMKGLT4_1,ACTTCCGTTC-CAATTCCGTG,40741590,40106869,634721,0,0.0103,0.9844,0.0156,0.0000
8,tih_rna_sample_00154_23KMKGLT4_1,CCACCTGCTT-TGTTACCGTC,73082244,71601573,1480671,0,0.0184,0.9797,0.0203,0.0000
8,tih_rna_sample_00480_23KMKGLT4_1,TGGTGGTTGT-TACCTGTCAA,114629181,112913880,1715301,0,0.0288,0.9850,0.0150,0.0000
8,tih_rna_sample_00156_23KMKGLT4_1,ACGCAACACA-CATTCAGGAG,7200789,7058190,142599,0,0.0018,0.9802,0.0198,0.0000
8,tih_rna_sample_00157_23KMKGLT4_1,CCAGTGCACT-CCTCCGTATC,102333128,99743331,2589797,0,0.0257,0.9747,0.0253,0.0000
8,tih_rna_sample_00158_23KMKGLT4_1,CATCAGGCGT-CGTGTTACCG,99197833,97230787,1967046,0,0.0250,0.9802,0.0198,0.0000
8,tih_rna_sample_00481_23KMKGLT4_1,ATCCTAGAAC-TGAAGTCTGC,103343852,101860980,1482872,0,0.0260,0.9857,0.0143,0.0000
8,tih_rna_sample_00482_23KMKGLT4_1,GCCTAGAGTC-ATGGTTCTCT,25122782,24750860,371922,0,0.0063,0.9852,0.0148,0.0000
8,tih_rna_sample_00161_23KMKGLT4_1,CTTACTCTCT-CTGCTTAAGG,84119033,82515710,1603323,0,0.0212,0.9809,0.0191,0.0000
8,tih_rna_sample_00300_23KMKGLT4_1,CCGACAACCT-TTCTACCTGT,37917335,37107584,809751,0,0.0095,0.9786,0.0214,0.0000
8,NTC_0001_0001_23KMKGLT4_1,GATCTGTATG-ATCGAAGAGC,779435,763980,15455,0,0.0002,0.9802,0.0198,0.0000
8,tih_rna_sample_00164_23KMKGLT4_1,ATAGGCAGTG-CAGAACTTAG,44480468,43813328,667140,0,0.0112,0.9850,0.0150,0.0000
8,tih_rna_sample_00334_23KMKGLT4_1,GAATAGAGTG-CACAGCGTCT,109974073,108331644,1642429,0,0.0277,0.9851,0.0149,0.0000
8,tih_rna_sample_00338_23KMKGLT4_1,GTAACAGGAA-TGTCTTCAGA,29199889,28681465,518424,0,0.0073,0.9822,0.0178,0.0000
8,tih_rna_sample_00166_23KMKGLT4_1,ATGGTTGTTG-AGTTATGAGG,102114365,100412534,1701831,0,0.0257,0.9833,0.0167,0.0000
8,tih_rna_sample_00339_23KMKGLT4_1,ACAATAGCAC-GTATGCCTAT,94995211,93522498,1472713,0,0.0239,0.9845,0.0155,0.0000
8,tih_rna_sample_00168_23KMKGLT4_1,CTACAAGTTC-GCACCATGAA,74645783,73490565,1155218,0,0.0188,0.9845,0.0155,0.0000
8,tih_rna_sample_00361_23KMKGLT4_1,AACCTGATCT-ATTCCGTCCG,84658341,83077794,1580547,0,0.0213,0.9813,0.0187,0.0000
8,Undetermined,,202217613,202217613,0,0,0.0509,1.0000,0.0000,0.0000