File Info

Filename
Quality_Metrics.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001exp0004/B23KMKGLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L004/Reports/Quality_Metrics.csv
Size
10.4 KB
Workflow Run
dev_rna_exp0001R_exp0004_73d51683
Published
Jun 07, 2026 11:43 PM

Content

View in new tab
Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_1 GCGCGGTTAA AAGCTATAGC 1 11834957804 11156041734 459049212624 38.79 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_1 GCGCGGTTAA AAGCTATAGC 2 11834957804 11064024848 457396208024 38.65 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_2 TTCCTTGAGG TAAGACAGCA 1 11625411329 11002662952 452223483391 38.90 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_2 TTCCTTGAGG TAAGACAGCA 2 11625411329 10867660250 449270913251 38.65 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_3 GAGTCGCTTC AGCGAAGATT 1 11642135787 11018644887 452878848912 38.90 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_3 GAGTCGCTTC AGCGAAGATT 2 11642135787 10790929959 447857791200 38.47 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_4 GTACGCTCAA ATTGATGGCG 1 11367049121 10670568952 439537241167 38.67 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_4 GTACGCTCAA ATTGATGGCG 2 11367049121 10586221478 438417472715 38.57 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_5 TAGAAGATCG CGACCAGTGT 1 12231528198 11527103190 474085213179 38.76 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_5 TAGAAGATCG CGACCAGTGT 2 12231528198 11388190371 471572038803 38.55 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_6 AACCTAGTGC TACAGGTCCT 1 12600200738 11974848733 491467016185 39.00 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_6 AACCTAGTGC TACAGGTCCT 2 12600200738 11769105070 486640890112 38.62 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_7 CGTGTATGTC GCATCTCTAT 1 11517466865 10847144370 446506669011 38.77 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_7 CGTGTATGTC GCATCTCTAT 2 11517466865 10774931192 445213582058 38.66 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_8 TTCAGATCCA TGGCATTGGA 1 9918895097 9320151292 383731115098 38.69 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_8 TTCAGATCCA TGGCATTGGA 2 9918895097 9227700971 382228153097 38.54 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_9 CTCACCAGTT TTGGTGTGTC 1 14105970322 13401296312 549660872600 38.97 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_9 CTCACCAGTT TTGGTGTGTC 2 14105970322 13210491325 545498423947 38.67 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_10 ACTAGTAGTC ACGTACACTC 1 12767878386 12084493732 496282289158 38.87 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_10 ACTAGTAGTC ACGTACACTC 2 12767878386 11722155026 488438952128 38.26 0.92
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_11 AATAGACTGC TCAAGGTCGC 1 12324332496 11745589895 481341124958 39.06 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_11 AATAGACTGC TCAAGGTCGC 2 12324332496 11493082712 475526535614 38.58 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_12 ATGATCAACG GTATAGCGTC 1 11023855717 10410061636 427888941517 38.81 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_12 ATGATCAACG GTATAGCGTC 2 11023855717 10103699834 420748721063 38.17 0.92
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_13 TAGGAAGCGG CCAATCCAGG 1 11498325501 10895293501 447170166298 38.89 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_13 TAGGAAGCGG CCAATCCAGG 2 11498325501 10771632659 444795699761 38.68 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_14 GCATCCTACT GACATCGCGA 1 10694091800 10083278588 414856347698 38.79 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_14 GCATCCTACT GACATCGCGA 2 10694091800 9957817247 412257557297 38.55 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_15 AGTCCAGCGT TGTCGTATTG 1 11619732974 11108571630 454724738718 39.13 0.96
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_15 AGTCCAGCGT TGTCGTATTG 2 11619732974 10883973025 449379766303 38.67 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_16 AGGCAGCCAT GAGTGTCTAG 1 11051952740 10534955495 431752989464 39.07 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_16 AGGCAGCCAT GAGTGTCTAG 2 11051952740 10342033135 427165643476 38.65 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_17 GCGACTCGTA CAGGCCATGT 1 12744416157 12048722823 495039290013 38.84 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_17 GCGACTCGTA CAGGCCATGT 2 12744416157 11894452172 492028413908 38.61 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_18 GTATCTGAGG ACGTATCTTG 1 13455280971 12771368771 524218630253 38.96 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_18 GTATCTGAGG ACGTATCTTG 2 13455280971 12595090911 520201479003 38.66 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_19 CATCACCTAA TGGTGGTATT 1 11650523384 11011738041 452333054079 38.83 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_19 CATCACCTAA TGGTGGTATT 2 11650523384 10887276841 449993240035 38.62 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_20 CGGCATATAC ATGAGCTGGA 1 11828032340 11259986425 461638272211 39.03 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_20 CGGCATATAC ATGAGCTGGA 2 11828032340 11036047885 456453600148 38.59 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_21 CACGAGTGTC TAGGCTAGAG 1 10500709875 9910772735 407474257913 38.80 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_21 CACGAGTGTC TAGGCTAGAG 2 10500709875 9824124813 405845891637 38.65 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_22 CGGAGACTAT ATGCTTCTAC 1 10598445531 10137765086 414849650810 39.14 0.96
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_22 CGGAGACTAT ATGCTTCTAC 2 10598445531 9922625023 409785497365 38.66 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_23 AAGGTGTTAG TGTGCTGGTG 1 12958886591 12413569852 507535072246 39.17 0.96
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_23 AAGGTGTTAG TGTGCTGGTG 2 12958886591 12143544186 501383525187 38.69 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_24 GCGATGGAAG GCCGCAAGAT 1 12074072344 11555191873 472717848415 39.15 0.96
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_24 GCGATGGAAG GCCGCAAGAT 2 12074072344 11305020905 466918546010 38.67 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_25 ACGGTCGCAT GTACTCTCTA 1 13316404308 12751488006 521530592544 39.16 0.96
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_25 ACGGTCGCAT GTACTCTCTA 2 13316404308 12462084603 514732539075 38.65 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_26 TTACACACGG AACTCCGAGA 1 12409856631 11786431381 483280703434 38.94 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_26 TTACACACGG AACTCCGAGA 2 12409856631 11607486361 479629598791 38.65 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_27 CGAGATTAGA CTAATCGCGG 1 7694724742 7285022131 299005322584 38.86 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_27 CGAGATTAGA CTAATCGCGG 2 7694724742 7175296507 297001587403 38.60 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_28 CAAGGATCGA GCAGACACAA 1 10812905999 10228444544 420039760580 38.85 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_28 CAAGGATCGA GCAGACACAA 2 10812905999 10116712842 417975863931 38.66 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_29 ACAACACACA CATCGGCACT 1 9848862203 9304097987 382191564380 38.81 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_29 ACAACACACA CATCGGCACT 2 9848862203 9190895999 380160855362 38.60 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_30 AAGAGCTCGC CCAATAGATC 1 9998777570 9508695287 390127256561 39.02 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_30 AAGAGCTCGC CCAATAGATC 2 9998777570 9312750312 385610327751 38.57 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_31 ACAGAGGCGT GACATATCGG 1 9852444829 9426649858 385668236878 39.14 0.96
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_31 ACAGAGGCGT GACATATCGG 2 9852444829 9211151419 380636416558 38.63 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_32 AACTGTACGG CTCCAATATG 1 10454321769 9875594789 405810665534 38.82 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_32 AACTGTACGG CTCCAATATG 2 10454321769 9786921782 404181181982 38.66 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_33 GCGAAGTAGG ACCATTGTGT 1 14331310038 13529272228 556051089334 38.80 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_33 GCGAAGTAGG ACCATTGTGT 2 14331310038 13392135402 553651974612 38.63 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_34 GTGAAGACAC TGGCTTGATC 1 11640757610 11075149228 454140432037 39.01 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_34 GTGAAGACAC TGGCTTGATC 2 11640757610 10870422159 449494938876 38.61 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_35 GACTTAGGTC CTATGGACTT 1 11006106120 10423702470 428257026198 38.91 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_35 GACTTAGGTC CTATGGACTT 2 11006106120 10290260561 425317498346 38.64 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_36 AGGACGGACA GAAGTCGTGG 1 9073755798 8559145109 351975883175 38.79 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_36 AGGACGGACA GAAGTCGTGG 2 9073755798 8454922770 349906759614 38.56 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_37 CCTATGTGTA TAGTGAGTCG 1 12877891248 12100587629 498170866658 38.68 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_37 CCTATGTGTA TAGTGAGTCG 2 12877891248 12014094919 496918513276 38.59 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_38 CAACGTTGAC TTGGACGGAA 1 8952728845 8532063857 349705518038 39.06 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_38 CAACGTTGAC TTGGACGGAA 2 8952728845 8356505430 345564990609 38.60 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_39 TGACATAGGT TACCAGAGAT 1 11545686802 10995339035 450688457663 39.04 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_39 TGACATAGGT TACCAGAGAT 2 11545686802 10796701981 446092096321 38.64 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_40 TTACACCAAC ATGAGTTAGG 1 8485909627 8065221082 330829005670 38.99 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_40 TTACACCAAC ATGAGTTAGG 2 8485909627 7928540698 327718389619 38.62 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_41 CCTGGAATTA CGTCATCGAA 1 12774958021 12110109682 497027105008 38.91 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_41 CCTGGAATTA CGTCATCGAA 2 12774958021 11959444712 493951715369 38.67 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_42 GCAACATCAA TGACCTAGTT 1 10037122359 9488101810 389680109158 38.82 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_42 GCAACATCAA TGACCTAGTT 2 10037122359 9371297593 387548950255 38.61 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_43 ACAGCCAGGT TCATGGTACT 1 10176341339 9673934218 396891329572 39.00 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_43 ACAGCCAGGT TCATGGTACT 2 10176341339 9514726320 393162139638 38.63 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_44 TAGTCCATCT GACAGGACAG 1 10404661342 9904185274 405981797365 39.02 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_44 TAGTCCATCT GACAGGACAG 2 10404661342 9727435636 401972345884 38.63 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_45 GCCTCTCAGA CGTGACGACT 1 9006659854 8468133196 348558942739 38.70 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_45 GCCTCTCAGA CGTGACGACT 2 9006659854 8388364474 347303599255 38.56 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_46 TAGGTTCAAG ACTTACCGGC 1 11893629609 11207202952 461338069099 38.79 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_46 TAGGTTCAAG ACTTACCGGC 2 11893629609 10830417703 452511417877 38.05 0.91
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_47 AAGACTCTCG GCTCTCCTTC 1 9466880070 8908667764 366683328505 38.73 0.94
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_47 AAGACTCTCG GCTCTCCTTC 2 9466880070 8819234408 365036874704 38.56 0.93
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_48 GAAGATCGAC AGTGACCACG 1 9058789735 8631985166 353846437967 39.06 0.95
4 FFPE_V4_0001_RNA_0005_23KMKGLT4_48 GAAGATCGAC AGTGACCACG 2 9058789735 8375458598 347958002516 38.41 0.92
4 Undetermined 1 30249764315 24748758348 1087904254125 35.96 0.82
4 Undetermined 2 30249764315 24111266390 1066536612539 35.26 0.80
99 rows