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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001exp0004/B23KMKGLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L008/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp0001R_exp0004_73d51683
Published
Jun 07, 2026 11:43 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
8 tih_rna_sample_00427_23KMKGLT4_1 TTGGATTGTC CGGCTGTTAG 1 11528712439 10929103183 448005356401 38.86 0.95
8 tih_rna_sample_00427_23KMKGLT4_1 TTGGATTGTC CGGCTGTTAG 2 11528712439 10882470361 447542839048 38.82 0.94
8 tih_rna_sample_00430_23KMKGLT4_1 AATTGGCACA CAGTCGGAGT 1 8292383799 7845985573 321825623107 38.81 0.95
8 tih_rna_sample_00430_23KMKGLT4_1 AATTGGCACA CAGTCGGAGT 2 8292383799 7826551724 321866993813 38.81 0.94
8 tih_rna_sample_00129_23KMKGLT4_1 AGGCAATCGC ATGAGTCTGT 1 12242706124 11664228283 477389304742 38.99 0.95
8 tih_rna_sample_00129_23KMKGLT4_1 AGGCAATCGC ATGAGTCTGT 2 12242706124 11582522631 475943401725 38.88 0.95
8 tih_rna_sample_00434_23KMKGLT4_1 TGCAACACTA CGTTCTGGTA 1 11680767174 11110593175 454781909686 38.93 0.95
8 tih_rna_sample_00434_23KMKGLT4_1 TGCAACACTA CGTTCTGGTA 2 11680767174 11054033695 454089868717 38.88 0.95
8 tih_rna_sample_00437_23KMKGLT4_1 GAATCGCCTG CATTGACGGC 1 15388620645 14660738993 599930859104 38.99 0.95
8 tih_rna_sample_00437_23KMKGLT4_1 GAATCGCCTG CATTGACGGC 2 15388620645 14436012641 595472489585 38.70 0.94
8 tih_rna_sample_00440_23KMKGLT4_1 TCGCATGACA TTGGCCAATG 1 6654097068 6189470629 255695209543 38.43 0.93
8 tih_rna_sample_00440_23KMKGLT4_1 TCGCATGACA TTGGCCAATG 2 6654097068 6188246173 256363321684 38.53 0.93
8 tih_rna_sample_00441_23KMKGLT4_1 TCAATACGTG GCTGCTAATA 1 13387745768 12818705393 523302877103 39.09 0.96
8 tih_rna_sample_00441_23KMKGLT4_1 TCAATACGTG GCTGCTAATA 2 13387745768 12709606784 521395658402 38.95 0.95
8 tih_rna_sample_00134_23KMKGLT4_1 ATTCTCCACG TCGATGATCG 1 5487826371 5016919870 209015867071 38.09 0.91
8 tih_rna_sample_00134_23KMKGLT4_1 ATTCTCCACG TCGATGATCG 2 5487826371 5020522304 209421480605 38.16 0.91
8 tih_rna_sample_00450_23KMKGLT4_1 TGTTACAGAG TGTGTACCAG 1 10964575231 10261983290 422953283597 38.57 0.94
8 tih_rna_sample_00450_23KMKGLT4_1 TGTTACAGAG TGTGTACCAG 2 10964575231 10268873989 423975980671 38.67 0.94
8 tih_rna_sample_00451_23KMKGLT4_1 TTACGGACGC ATTGGCCAGC 1 11073515238 10548345725 432012165053 39.01 0.95
8 tih_rna_sample_00451_23KMKGLT4_1 TTACGGACGC ATTGGCCAGC 2 11073515238 10390827246 428674254390 38.71 0.94
8 tih_rna_sample_00136_23KMKGLT4_1 CCAATGTTGA CTTGAATGTC 1 12600990468 12014183525 491305542680 38.99 0.95
8 tih_rna_sample_00136_23KMKGLT4_1 CCAATGTTGA CTTGAATGTC 2 12600990468 11959717766 490686201902 38.94 0.95
8 tih_rna_sample_00453_23KMKGLT4_1 CGTACTTAGA CCGATGTTCA 1 8788585503 8344650060 341791885779 38.89 0.95
8 tih_rna_sample_00453_23KMKGLT4_1 CGTACTTAGA CCGATGTTCA 2 8788585503 8333543515 342028736974 38.92 0.95
8 tih_rna_sample_00457_23KMKGLT4_1 GCCGTGAACA GCACCACCAT 1 15013064317 14348603161 586178805538 39.04 0.96
8 tih_rna_sample_00457_23KMKGLT4_1 GCCGTGAACA GCACCACCAT 2 15013064317 14251971625 584705772670 38.95 0.95
8 tih_rna_sample_00462_23KMKGLT4_1 AGGAGACCAC TACCACGTAG 1 18655537355 17877737970 729952159671 39.13 0.96
8 tih_rna_sample_00462_23KMKGLT4_1 AGGAGACCAC TACCACGTAG 2 18655537355 17726550594 726980613786 38.97 0.95
8 FFPE_V4_0001_RNA_0001_23KMKGLT4_1 GAAGCAAGCG TCACCGACTA 1 15044795759 14439948146 589055591015 39.15 0.96
8 FFPE_V4_0001_RNA_0001_23KMKGLT4_1 GAAGCAAGCG TCACCGACTA 2 15044795759 14255805524 585324879473 38.91 0.95
8 tih_rna_sample_00460_23KMKGLT4_1 AACGCGACTG GACCTACGAG 1 8268119458 7760403035 319611988295 38.66 0.94
8 tih_rna_sample_00460_23KMKGLT4_1 AACGCGACTG GACCTACGAG 2 8268119458 7743239643 319705121352 38.67 0.94
8 tih_rna_sample_00141_23KMKGLT4_1 TTCGCGGACT AGAGAGTGGT 1 15085091166 14460200177 590475537014 39.14 0.96
8 tih_rna_sample_00141_23KMKGLT4_1 TTCGCGGACT AGAGAGTGGT 2 15085091166 13994694713 579303065732 38.40 0.93
8 tih_rna_sample_00464_23KMKGLT4_1 TCGTGACGAC GTGACTAACT 1 11767206218 11243576930 459912946508 39.08 0.96
8 tih_rna_sample_00464_23KMKGLT4_1 TCGTGACGAC GTGACTAACT 2 11767206218 11147638348 457836679006 38.91 0.95
8 tih_rna_sample_00467_23KMKGLT4_1 TCAATCTAGC TCCGAATAAG 1 11541309312 10678059749 442382093192 38.33 0.93
8 tih_rna_sample_00467_23KMKGLT4_1 TCAATCTAGC TCCGAATAAG 2 11541309312 10811384440 446334128425 38.67 0.94
8 tih_rna_sample_00473_23KMKGLT4_1 GCGGAGTCAA CTCTATAGCT 1 17272295664 16458493722 673262251698 38.98 0.95
8 tih_rna_sample_00473_23KMKGLT4_1 GCGGAGTCAA CTCTATAGCT 2 17272295664 16388741541 672484702374 38.93 0.95
8 tih_rna_sample_00145_23KMKGLT4_1 GATGCTAGAA TGGATGCCAG 1 12548721818 11820410549 485883682691 38.72 0.94
8 tih_rna_sample_00145_23KMKGLT4_1 GATGCTAGAA TGGATGCCAG 2 12548721818 11842611603 487208029956 38.83 0.94
8 tih_rna_sample_00146_23KMKGLT4_1 ACGATGGTTA AATTGCTAGG 1 16470506502 15814128826 644846546593 39.15 0.96
8 tih_rna_sample_00146_23KMKGLT4_1 ACGATGGTTA AATTGCTAGG 2 16470506502 15673310742 642267372936 38.99 0.95
8 tih_rna_sample_00461_23KMKGLT4_1 AGAGCAGTAT CAAGAGGAGG 1 21135588233 20438684272 831606013663 39.35 0.97
8 tih_rna_sample_00461_23KMKGLT4_1 AGAGCAGTAT CAAGAGGAGG 2 21135588233 20095897402 823809748870 38.98 0.95
8 tih_rna_sample_00475_23KMKGLT4_1 TTGTGATCCT ATGAAGGCAT 1 11402652203 10940306891 446461837700 39.15 0.96
8 tih_rna_sample_00475_23KMKGLT4_1 TTGTGATCCT ATGAAGGCAT 2 11402652203 10797426540 443385122271 38.88 0.95
8 tih_rna_sample_00476_23KMKGLT4_1 TAAGATCGGA TTCATCCGTG 1 10690137261 10104126486 414618218505 38.79 0.95
8 tih_rna_sample_00476_23KMKGLT4_1 TAAGATCGGA TTCATCCGTG 2 10690137261 10112873145 415570846701 38.87 0.95
8 FFPE_HD789_02_RNA_0011_23KMKGLT4_1 TTAGTTGCTG ATGGCGGATT 1 15664073184 15061740829 613860925540 39.19 0.96
8 FFPE_HD789_02_RNA_0011_23KMKGLT4_1 TTAGTTGCTG ATGGCGGATT 2 15664073184 14899805493 610669615848 38.99 0.95
8 tih_rna_sample_00149_23KMKGLT4_1 AGTCAGATGC CTCACACACT 1 9942766385 9414269147 386517783779 38.87 0.95
8 tih_rna_sample_00149_23KMKGLT4_1 AGTCAGATGC CTCACACACT 2 9942766385 9406910460 386568345678 38.88 0.95
8 tih_rna_sample_00150_23KMKGLT4_1 AGTACAACTG CATTGAGTTC 1 17995029229 17097979370 700242196373 38.91 0.95
8 tih_rna_sample_00150_23KMKGLT4_1 AGTACAACTG CATTGAGTTC 2 17995029229 17084716300 700893136156 38.95 0.95
8 tih_rna_sample_00151_23KMKGLT4_1 CTTAGTACGC GCTACAACGA 1 13387353470 12869044910 524766536522 39.20 0.96
8 tih_rna_sample_00151_23KMKGLT4_1 CTTAGTACGC GCTACAACGA 2 13387353470 12737756533 522001821397 38.99 0.95
8 tih_rna_sample_00479_23KMKGLT4_1 GTACGCATCG GAGTTGTTCA 1 14139413198 13411073159 549787282886 38.88 0.95
8 tih_rna_sample_00479_23KMKGLT4_1 GTACGCATCG GAGTTGTTCA 2 14139413198 13413412026 550498294209 38.93 0.95
8 tih_rna_sample_00153_23KMKGLT4_1 ACTTCCGTTC CAATTCCGTG 1 6151980090 5663506158 235425340989 38.27 0.92
8 tih_rna_sample_00153_23KMKGLT4_1 ACTTCCGTTC CAATTCCGTG 2 6151980090 5743266203 237541714169 38.61 0.93
8 tih_rna_sample_00154_23KMKGLT4_1 CCACCTGCTT TGTTACCGTC 1 11035418844 10591396361 432157554599 39.16 0.96
8 tih_rna_sample_00154_23KMKGLT4_1 CCACCTGCTT TGTTACCGTC 2 11035418844 10264406019 424398840207 38.46 0.93
8 tih_rna_sample_00480_23KMKGLT4_1 TGGTGGTTGT TACCTGTCAA 1 17309006331 16594648407 677855346501 39.16 0.96
8 tih_rna_sample_00480_23KMKGLT4_1 TGGTGGTTGT TACCTGTCAA 2 17309006331 16379265399 672964344702 38.88 0.95
8 tih_rna_sample_00156_23KMKGLT4_1 ACGCAACACA CATTCAGGAG 1 1087319139 968766547 40865344444 37.58 0.89
8 tih_rna_sample_00156_23KMKGLT4_1 ACGCAACACA CATTCAGGAG 2 1087319139 982830295 41283206701 37.97 0.90
8 tih_rna_sample_00157_23KMKGLT4_1 CCAGTGCACT CCTCCGTATC 1 15452302328 14684774045 601827962849 38.95 0.95
8 tih_rna_sample_00157_23KMKGLT4_1 CCAGTGCACT CCTCCGTATC 2 15452302328 14592622513 599928723982 38.82 0.94
8 tih_rna_sample_00158_23KMKGLT4_1 CATCAGGCGT CGTGTTACCG 1 14978872783 14387553685 587095410754 39.19 0.96
8 tih_rna_sample_00158_23KMKGLT4_1 CATCAGGCGT CGTGTTACCG 2 14978872783 14077913980 580073794111 38.73 0.94
8 tih_rna_sample_00481_23KMKGLT4_1 ATCCTAGAAC TGAAGTCTGC 1 15604921652 15037660294 612708773536 39.26 0.96
8 tih_rna_sample_00481_23KMKGLT4_1 ATCCTAGAAC TGAAGTCTGC 2 15604921652 14813823389 607697218241 38.94 0.95
8 tih_rna_sample_00482_23KMKGLT4_1 GCCTAGAGTC ATGGTTCTCT 1 3793540082 3507813300 145358809131 38.32 0.92
8 tih_rna_sample_00482_23KMKGLT4_1 GCCTAGAGTC ATGGTTCTCT 2 3793540082 3531658238 146219614976 38.54 0.93
8 tih_rna_sample_00161_23KMKGLT4_1 CTTACTCTCT CTGCTTAAGG 1 12701973983 12001244913 493194718443 38.83 0.94
8 tih_rna_sample_00161_23KMKGLT4_1 CTTACTCTCT CTGCTTAAGG 2 12701973983 11979250966 493059417220 38.82 0.94
8 tih_rna_sample_00300_23KMKGLT4_1 CCGACAACCT TTCTACCTGT 1 5725517585 5297231060 219694112801 38.37 0.93
8 tih_rna_sample_00300_23KMKGLT4_1 CCGACAACCT TTCTACCTGT 2 5725517585 5253287644 218885312923 38.23 0.92
8 NTC_0001_0001_23KMKGLT4_1 GATCTGTATG ATCGAAGAGC 1 117694685 75700465 3776524879 32.09 0.64
8 NTC_0001_0001_23KMKGLT4_1 GATCTGTATG ATCGAAGAGC 2 117694685 86790464 4103434379 34.87 0.74
8 tih_rna_sample_00164_23KMKGLT4_1 ATAGGCAGTG CAGAACTTAG 1 6716550668 6095853143 254785537589 37.93 0.91
8 tih_rna_sample_00164_23KMKGLT4_1 ATAGGCAGTG CAGAACTTAG 2 6716550668 6211778141 257977603148 38.41 0.92
8 tih_rna_sample_00334_23KMKGLT4_1 GAATAGAGTG CACAGCGTCT 1 16606085023 15908745939 649393550457 39.11 0.96
8 tih_rna_sample_00334_23KMKGLT4_1 GAATAGAGTG CACAGCGTCT 2 16606085023 15780747581 647068033427 38.97 0.95
8 tih_rna_sample_00338_23KMKGLT4_1 GTAACAGGAA TGTCTTCAGA 1 4409183239 4093257193 169358378383 38.41 0.93
8 tih_rna_sample_00338_23KMKGLT4_1 GTAACAGGAA TGTCTTCAGA 2 4409183239 4115991123 170220113454 38.61 0.93
8 tih_rna_sample_00166_23KMKGLT4_1 ATGGTTGTTG AGTTATGAGG 1 15419269115 14656326621 600137567187 38.92 0.95
8 tih_rna_sample_00166_23KMKGLT4_1 ATGGTTGTTG AGTTATGAGG 2 15419269115 14614262000 599999974928 38.91 0.95
8 tih_rna_sample_00339_23KMKGLT4_1 ACAATAGCAC GTATGCCTAT 1 14344276861 13701710516 560376939338 39.07 0.96
8 tih_rna_sample_00339_23KMKGLT4_1 ACAATAGCAC GTATGCCTAT 2 14344276861 13565195305 557447094343 38.86 0.95
8 tih_rna_sample_00168_23KMKGLT4_1 CTACAAGTTC GCACCATGAA 1 11271513233 10639285491 437245261566 38.79 0.94
8 tih_rna_sample_00168_23KMKGLT4_1 CTACAAGTTC GCACCATGAA 2 11271513233 10597351633 436678213654 38.74 0.94
8 tih_rna_sample_00361_23KMKGLT4_1 AACCTGATCT ATTCCGTCCG 1 12783409491 12202448599 499197889330 39.05 0.95
8 tih_rna_sample_00361_23KMKGLT4_1 AACCTGATCT ATTCCGTCCG 2 12783409491 12059376192 496258395645 38.82 0.94
8 Undetermined 1 30534859563 25627678730 1110997505810 36.38 0.84
8 Undetermined 2 30534859563 24692477365 1085033940250 35.53 0.81
99 rows