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Filename
Demultiplex_Stats_aggregate.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001exp0004/B23KMKGLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/reports/Demultiplex_Stats_aggregate.csv
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11.7 KB
Workflow Run
dev_rna_exp0001R_exp0004_73d51683
Published
Jun 07, 2026 11:44 PM

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SampleID Lanes Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
FFPE_HD789_02_RNA_0011_23KMKGLT4_1 5,6,7,8 TTAGTTGCTG-ATGGCGGATT 398309082 391464472 6844610 0 0.013 0.9828 0.0172 0.0
FFPE_V4_0001_RNA_0001_23KMKGLT4_1 5,6,7,8 GAAGCAAGCG-TCACCGACTA 380414695 371927881 8486814 0 0.0124 0.9777 0.0223 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_1 1,2,3,4 GCGCGGTTAA-AAGCTATAGC 316554234 303880738 12673496 0 0.0103 0.96 0.04 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_10 1,2,3,4 ACTAGTAGTC-ACGTACACTC 346266906 334479335 11787571 0 0.0113 0.966 0.034 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_11 1,2,3,4 AATAGACTGC-TCAAGGTCGC 328267241 316117477 12149764 0 0.0107 0.963 0.037 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_12 1,2,3,4 ATGATCAACG-GTATAGCGTC 298479405 287271423 11207982 0 0.0097 0.9624 0.0376 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_13 1,2,3,4 TAGGAAGCGG-CCAATCCAGG 309596152 298700692 10895460 0 0.0101 0.9648 0.0352 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_14 1,2,3,4 GCATCCTACT-GACATCGCGA 287648589 276126670 11521919 0 0.0094 0.9599 0.0401 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_15 1,2,3,4 AGTCCAGCGT-TGTCGTATTG 309267916 297559784 11708132 0 0.0101 0.9621 0.0379 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_16 1,2,3,4 AGGCAGCCAT-GAGTGTCTAG 296333419 285576584 10756835 0 0.0097 0.9637 0.0363 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_17 1,2,3,4 GCGACTCGTA-CAGGCCATGT 342161508 323167089 18994419 0 0.0112 0.9445 0.0555 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_18 1,2,3,4 GTATCTGAGG-ACGTATCTTG 361431251 349227502 12203749 0 0.0118 0.9662 0.0338 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_19 1,2,3,4 CATCACCTAA-TGGTGGTATT 312149982 297417102 14732880 0 0.0102 0.9528 0.0472 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_2 1,2,3,4 TTCCTTGAGG-TAAGACAGCA 313298390 301302737 11995653 0 0.0102 0.9617 0.0383 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_20 1,2,3,4 CGGCATATAC-ATGAGCTGGA 316833634 305270310 11563324 0 0.0103 0.9635 0.0365 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_21 1,2,3,4 CACGAGTGTC-TAGGCTAGAG 282818424 273498190 9320234 0 0.0092 0.967 0.033 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_22 1,2,3,4 CGGAGACTAT-ATGCTTCTAC 286654986 274995595 11659391 0 0.0093 0.9593 0.0407 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_23 1,2,3,4 AAGGTGTTAG-TGTGCTGGTG 346762453 333045207 13717246 0 0.0113 0.9604 0.0396 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_24 1,2,3,4 GCGATGGAAG-GCCGCAAGAT 323010094 310154932 12855162 0 0.0105 0.9602 0.0398 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_25 1,2,3,4 ACGGTCGCAT-GTACTCTCTA 359070196 346430606 12639590 0 0.0117 0.9648 0.0352 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_26 1,2,3,4 TTACACACGG-AACTCCGAGA 334665710 323198168 11467542 0 0.0109 0.9657 0.0343 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_27 1,2,3,4 CGAGATTAGA-CTAATCGCGG 208625835 199166507 9459328 0 0.0068 0.9547 0.0453 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_28 1,2,3,4 CAAGGATCGA-GCAGACACAA 290074347 279868256 10206091 0 0.0095 0.9648 0.0352 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_29 1,2,3,4 ACAACACACA-CATCGGCACT 265700909 256251091 9449818 0 0.0087 0.9644 0.0356 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_3 1,2,3,4 GAGTCGCTTC-AGCGAAGATT 315988524 303412259 12576265 0 0.0103 0.9602 0.0398 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_30 1,2,3,4 AAGAGCTCGC-CCAATAGATC 267350151 257767211 9582940 0 0.0087 0.9642 0.0358 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_31 1,2,3,4 ACAGAGGCGT-GACATATCGG 265427923 255761466 9666457 0 0.0087 0.9636 0.0364 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_32 1,2,3,4 AACTGTACGG-CTCCAATATG 280974122 270559396 10414726 0 0.0092 0.9629 0.0371 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_33 1,2,3,4 GCGAAGTAGG-ACCATTGTGT 386115309 372689848 13425461 0 0.0126 0.9652 0.0348 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_34 1,2,3,4 GTGAAGACAC-TGGCTTGATC 313550696 302647358 10903338 0 0.0102 0.9652 0.0348 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_35 1,2,3,4 GACTTAGGTC-CTATGGACTT 296805850 286886800 9919050 0 0.0097 0.9666 0.0334 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_36 1,2,3,4 AGGACGGACA-GAAGTCGTGG 241738036 232251373 9486663 0 0.0079 0.9608 0.0392 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_37 1,2,3,4 CCTATGTGTA-TAGTGAGTCG 344780174 331929240 12850934 0 0.0112 0.9627 0.0373 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_38 1,2,3,4 CAACGTTGAC-TTGGACGGAA 241324667 232194279 9130388 0 0.0079 0.9622 0.0378 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_39 1,2,3,4 TGACATAGGT-TACCAGAGAT 310395985 299377975 11018010 0 0.0101 0.9645 0.0355 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_4 1,2,3,4 GTACGCTCAA-ATTGATGGCG 307972916 296862115 11110801 0 0.01 0.9639 0.0361 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_40 1,2,3,4 TTACACCAAC-ATGAGTTAGG 229817167 221654254 8162913 0 0.0075 0.9645 0.0355 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_41 1,2,3,4 CCTGGAATTA-CGTCATCGAA 345503110 329779329 15723781 0 0.0113 0.9545 0.0455 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_42 1,2,3,4 GCAACATCAA-TGACCTAGTT 272022885 261373991 10648894 0 0.0089 0.9609 0.0391 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_43 1,2,3,4 ACAGCCAGGT-TCATGGTACT 274792258 264992082 9800176 0 0.009 0.9643 0.0357 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_44 1,2,3,4 TAGTCCATCT-GACAGGACAG 279511881 269213006 10298875 0 0.0091 0.9632 0.0368 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_45 1,2,3,4 GCCTCTCAGA-CGTGACGACT 243167121 233944090 9223031 0 0.0079 0.9621 0.0379 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_46 1,2,3,4 TAGGTTCAAG-ACTTACCGGC 320543061 309673281 10869780 0 0.0105 0.9661 0.0339 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_47 1,2,3,4 AAGACTCTCG-GCTCTCCTTC 256513508 246045302 10468206 0 0.0084 0.9592 0.0408 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_48 1,2,3,4 GAAGATCGAC-AGTGACCACG 244482262 235392743 9089519 0 0.008 0.9628 0.0372 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_5 1,2,3,4 TAGAAGATCG-CGACCAGTGT 324681009 309016423 15664586 0 0.0106 0.9518 0.0482 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_6 1,2,3,4 AACCTAGTGC-TACAGGTCCT 339049112 327147816 11901296 0 0.0111 0.9649 0.0351 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_7 1,2,3,4 CGTGTATGTC-GCATCTCTAT 312680031 301951438 10728593 0 0.0102 0.9657 0.0343 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_8 1,2,3,4 TTCAGATCCA-TGGCATTGGA 266970922 257540009 9430913 0 0.0087 0.9647 0.0353 0.0
FFPE_V4_0001_RNA_0005_23KMKGLT4_9 1,2,3,4 CTCACCAGTT-TTGGTGTGTC 376509783 361513470 14996313 0 0.0123 0.9602 0.0398 0.0
NTC_0001_0001_23KMKGLT4_1 5,6,7,8 GATCTGTATG-ATCGAAGAGC 3096639 3031627 65012 0 0.0001 0.979 0.021 0.0
Undetermined 1,2,3,4,5,6,7,8 1595731550 1595731550 0 0 0.052 1.0 0.0 0.0
tih_rna_sample_00129_23KMKGLT4_1 5,6,7,8 AGGCAATCGC-ATGAGTCTGT 314468772 309644823 4823949 0 0.0103 0.9847 0.0153 0.0
tih_rna_sample_00134_23KMKGLT4_1 5,6,7,8 ATTCTCCACG-TCGATGATCG 141679553 138863887 2815666 0 0.0046 0.9801 0.0199 0.0
tih_rna_sample_00136_23KMKGLT4_1 5,6,7,8 CCAATGTTGA-CTTGAATGTC 322985408 318364796 4620612 0 0.0105 0.9857 0.0143 0.0
tih_rna_sample_00141_23KMKGLT4_1 5,6,7,8 TTCGCGGACT-AGAGAGTGGT 383296044 376412574 6883470 0 0.0125 0.982 0.018 0.0
tih_rna_sample_00145_23KMKGLT4_1 5,6,7,8 GATGCTAGAA-TGGATGCCAG 321969734 316630089 5339645 0 0.0105 0.9834 0.0166 0.0
tih_rna_sample_00146_23KMKGLT4_1 5,6,7,8 ACGATGGTTA-AATTGCTAGG 419344106 410684647 8659459 0 0.0137 0.9793 0.0207 0.0
tih_rna_sample_00149_23KMKGLT4_1 5,6,7,8 AGTCAGATGC-CTCACACACT 256339470 251231363 5108107 0 0.0084 0.9801 0.0199 0.0
tih_rna_sample_00150_23KMKGLT4_1 5,6,7,8 AGTACAACTG-CATTGAGTTC 459126156 452250665 6875491 0 0.015 0.985 0.015 0.0
tih_rna_sample_00151_23KMKGLT4_1 5,6,7,8 CTTAGTACGC-GCTACAACGA 340297590 334221968 6075622 0 0.0111 0.9821 0.0179 0.0
tih_rna_sample_00153_23KMKGLT4_1 5,6,7,8 ACTTCCGTTC-CAATTCCGTG 159603286 156943960 2659326 0 0.0052 0.9833 0.0167 0.0
tih_rna_sample_00154_23KMKGLT4_1 5,6,7,8 CCACCTGCTT-TGTTACCGTC 281813152 275654224 6158928 0 0.0092 0.9781 0.0219 0.0
tih_rna_sample_00156_23KMKGLT4_1 5,6,7,8 ACGCAACACA-CATTCAGGAG 28063786 27451942 611844 0 0.0009 0.9782 0.0218 0.0
tih_rna_sample_00157_23KMKGLT4_1 5,6,7,8 CCAGTGCACT-CCTCCGTATC 396925622 386052495 10873127 0 0.0129 0.9726 0.0274 0.0
tih_rna_sample_00158_23KMKGLT4_1 5,6,7,8 CATCAGGCGT-CGTGTTACCG 384767440 376628949 8138491 0 0.0125 0.9788 0.0212 0.0
tih_rna_sample_00161_23KMKGLT4_1 5,6,7,8 CTTACTCTCT-CTGCTTAAGG 327692197 320846456 6845741 0 0.0107 0.9791 0.0209 0.0
tih_rna_sample_00164_23KMKGLT4_1 5,6,7,8 ATAGGCAGTG-CAGAACTTAG 172680235 169872148 2808087 0 0.0056 0.9837 0.0163 0.0
tih_rna_sample_00166_23KMKGLT4_1 5,6,7,8 ATGGTTGTTG-AGTTATGAGG 392689827 385431591 7258236 0 0.0128 0.9815 0.0185 0.0
tih_rna_sample_00168_23KMKGLT4_1 5,6,7,8 CTACAAGTTC-GCACCATGAA 289581088 284775170 4805918 0 0.0094 0.9834 0.0166 0.0
tih_rna_sample_00300_23KMKGLT4_1 5,6,7,8 CCGACAACCT-TTCTACCTGT 148051492 144602806 3448686 0 0.0048 0.9767 0.0233 0.0
tih_rna_sample_00334_23KMKGLT4_1 5,6,7,8 GAATAGAGTG-CACAGCGTCT 421894590 415004565 6890025 0 0.0138 0.9837 0.0163 0.0
tih_rna_sample_00338_23KMKGLT4_1 5,6,7,8 GTAACAGGAA-TGTCTTCAGA 113617216 111415951 2201265 0 0.0037 0.9806 0.0194 0.0
tih_rna_sample_00339_23KMKGLT4_1 5,6,7,8 ACAATAGCAC-GTATGCCTAT 367268702 361180658 6088044 0 0.012 0.9834 0.0166 0.0
tih_rna_sample_00361_23KMKGLT4_1 5,6,7,8 AACCTGATCT-ATTCCGTCCG 329128952 322509864 6619088 0 0.0107 0.9799 0.0201 0.0
tih_rna_sample_00427_23KMKGLT4_1 5,6,7,8 TTGGATTGTC-CGGCTGTTAG 296015237 290219166 5796071 0 0.0097 0.9804 0.0196 0.0
tih_rna_sample_00430_23KMKGLT4_1 5,6,7,8 AATTGGCACA-CAGTCGGAGT 213076026 209300414 3775612 0 0.0069 0.9823 0.0177 0.0
tih_rna_sample_00434_23KMKGLT4_1 5,6,7,8 TGCAACACTA-CGTTCTGGTA 298726269 293334007 5392262 0 0.0097 0.9819 0.0181 0.0
tih_rna_sample_00437_23KMKGLT4_1 5,6,7,8 GAATCGCCTG-CATTGACGGC 392691073 384363595 8327478 0 0.0128 0.9788 0.0212 0.0
tih_rna_sample_00440_23KMKGLT4_1 5,6,7,8 TCGCATGACA-TTGGCCAATG 171782233 168449936 3332297 0 0.0056 0.9806 0.0194 0.0
tih_rna_sample_00441_23KMKGLT4_1 5,6,7,8 TCAATACGTG-GCTGCTAATA 340809187 334144658 6664529 0 0.0111 0.9804 0.0196 0.0
tih_rna_sample_00450_23KMKGLT4_1 5,6,7,8 TGTTACAGAG-TGTGTACCAG 281257814 270508992 10748822 0 0.0092 0.9618 0.0382 0.0
tih_rna_sample_00451_23KMKGLT4_1 5,6,7,8 TTACGGACGC-ATTGGCCAGC 284973341 279700589 5272752 0 0.0093 0.9815 0.0185 0.0
tih_rna_sample_00453_23KMKGLT4_1 5,6,7,8 CGTACTTAGA-CCGATGTTCA 224877944 221151818 3726126 0 0.0073 0.9834 0.0166 0.0
tih_rna_sample_00457_23KMKGLT4_1 5,6,7,8 GCCGTGAACA-GCACCACCAT 381162042 372386099 8775943 0 0.0124 0.977 0.023 0.0
tih_rna_sample_00460_23KMKGLT4_1 5,6,7,8 AACGCGACTG-GACCTACGAG 211739062 207516678 4222384 0 0.0069 0.9801 0.0199 0.0
tih_rna_sample_00461_23KMKGLT4_1 5,6,7,8 AGAGCAGTAT-CAAGAGGAGG 539397523 530200798 9196725 0 0.0176 0.983 0.017 0.0
tih_rna_sample_00462_23KMKGLT4_1 5,6,7,8 AGGAGACCAC-TACCACGTAG 477634127 468784869 8849258 0 0.0156 0.9815 0.0185 0.0
tih_rna_sample_00464_23KMKGLT4_1 5,6,7,8 TCGTGACGAC-GTGACTAACT 302357247 297446029 4911218 0 0.0099 0.9838 0.0162 0.0
tih_rna_sample_00467_23KMKGLT4_1 5,6,7,8 TCAATCTAGC-TCCGAATAAG 298344512 293312600 5031912 0 0.0097 0.9831 0.0169 0.0
tih_rna_sample_00473_23KMKGLT4_1 5,6,7,8 GCGGAGTCAA-CTCTATAGCT 441481647 432789557 8692090 0 0.0144 0.9803 0.0197 0.0
tih_rna_sample_00475_23KMKGLT4_1 5,6,7,8 TTGTGATCCT-ATGAAGGCAT 290590318 286243843 4346475 0 0.0095 0.985 0.015 0.0
tih_rna_sample_00476_23KMKGLT4_1 5,6,7,8 TAAGATCGGA-TTCATCCGTG 274202638 270248566 3954072 0 0.0089 0.9856 0.0144 0.0
tih_rna_sample_00479_23KMKGLT4_1 5,6,7,8 GTACGCATCG-GAGTTGTTCA 361174115 353002998 8171117 0 0.0118 0.9774 0.0226 0.0
tih_rna_sample_00480_23KMKGLT4_1 5,6,7,8 TGGTGGTTGT-TACCTGTCAA 444416468 437280061 7136407 0 0.0145 0.9839 0.0161 0.0
tih_rna_sample_00481_23KMKGLT4_1 5,6,7,8 ATCCTAGAAC-TGAAGTCTGC 399675410 393471219 6204191 0 0.013 0.9845 0.0155 0.0
tih_rna_sample_00482_23KMKGLT4_1 5,6,7,8 GCCTAGAGTC-ATGGTTCTCT 98313547 96773150 1540397 0 0.0032 0.9843 0.0157 0.0
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