ARRIBA FILTERING SUMMARY
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Input file: V4_0001_RNA_0005_23H5VFLT4_s22.arriba.fusions.tsv
Filter config: arriba_filter_config.yaml
AIH blacklist breakpoints (staged path): blacklist_breakpoint_database_2026-04-27.tsv
Output TSV (all rows): V4_0001_RNA_0005_23H5VFLT4_s22.arriba.fusions.filtered.tsv
Output TSV (PASS only): V4_0001_RNA_0005_23H5VFLT4_s22.arriba.fusions.filtered_pass_only.tsv

Total fusions: 55
Pass (FILTER=PASS): 12 (21.8%)
Fail (FILTER=FAIL): 43 (78.2%)

AIH curated blacklist:
  Total blacklisted: 8
  All blacklisted rows have FILTER=FAIL

Failure reasons:
  confidence_below_min(medium<high): 5
  confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 5
  confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 5
  confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 5
  same_gene;confidence_below_min(medium<high): 3
  confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 3
  same_gene;confidence_below_min(medium<high);aih_curated_blacklist: 2
  confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 2
  confidence_below_min(low<high): 2
  confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 2
  aih_curated_blacklist: 1
  total_reads_below_min(3.0<8.0);aih_curated_blacklist: 1
  confidence_below_min(low<high);total_reads_below_min(0.0<8.0);aih_curated_blacklist: 1
  confidence_below_min(medium<high);aih_curated_blacklist: 1
  confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 1
  same_gene;confidence_below_min(low<high);aih_curated_blacklist: 1
  confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 1
  confidence_below_min(low<high);total_reads_below_min(6.0<8.0);aih_curated_blacklist: 1
  confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 1

Breakdown by confidence:
  high: 12 pass, 2 fail (total: 14)
  low: 0 pass, 27 fail (total: 27)
  medium: 0 pass, 14 fail (total: 14)