File Info
- Filename
- V4_0001_RNA_0005_23H5VFLT4_s11.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0001/B23H5VFLT4/nfcore_rnafusion_100M__5f1fa79--20260304-093157/fusioninspector/V4_0001_RNA_0005_23H5VFLT4_s11.FusionInspector.fusions.abridged.tsv
- Size
- 4.6 KB
- Workflow Run
- dev_rna_exp0001_5f1fa79
- Published
- Mar 04, 2026 3:23 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1277 | 3 | 1277.00 | 3.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 38 | 1133 | 32.85 | 1.13 | GT | 1.8892 | AG | 1.7819 | 13.0282 | 627 | 0 |
| TMPRSS2--ERG | 665 | 0 | 665.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 38 | 666.00 | 17.08 | GT | 1.6895 | AG | 1.9219 | 6.7686 | 1104 | 0 |
| LMNA--NTRK1 | 398 | 2 | 398.00 | 2.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1759 | 107 | 0.23 | 3.71 | GT | 1.7465 | AG | 1.5058 | 4.0714 | 947 | 0 |
| FGFR3--BAIAP2L1 | 346 | 2 | 346.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 38 | 28 | 8.95 | 12.03 | GT | 1.8892 | AG | 1.8062 | 3.5421 | 1171 | 0 |
| CCDC6--RET | 336 | 3 | 336.00 | 3.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1024 | 156 | 0.33 | 2.17 | GT | 1.8892 | AG | 1.8323 | 3.4504 | 2092 | 0 |
| TPM3--NTRK1 | 284 | 2 | 284.00 | 2.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 3872 | 8 | 0.07 | 31.89 | GT | 1.9329 | AG | 1.6895 | 2.911 | 355 | 0 |
| ETV6--NTRK3 | 264 | 2 | 264.00 | 2.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1385 | 9 | 0.19 | 26.70 | GT | 1.7819 | AG | 1.9656 | 2.7075 | 1252 | 0 |
| NCOA4--RET | 250 | 1 | 250.00 | 1.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1283 | 156 | 0.20 | 1.61 | GT | 1.9086 | AG | 1.8323 | 2.5548 | 5144 | 0 |
| KIF5B--RET | 237 | 3 | 237.00 | 3.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 655 | 11 | 0.37 | 20.08 | GT | 1.9656 | AG | 1.9656 | 2.4428 | 3178 | 0 |
| SLC34A2--ROS1 | 217 | 7 | 217.00 | 7.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 17 | 225.00 | 12.50 | GT | 1.8892 | AG | 1.7465 | 2.2799 | 999 | 0 |
| EML4--ALK | 185 | 0 | 185.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 245 | 14 | 0.76 | 12.40 | GT | 1.6895 | AG | 1.9086 | 1.883 | 1550 | 0 |
| TFG--NTRK1 | 150 | 0 | 150.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 736 | 9 | 0.20 | 15.10 | GT | 1.9329 | AG | 1.6895 | 1.5267 | 883 | 0 |
| CD74--ROS1 | 141 | 1 | 141.00 | 0.98 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 13887 | 17 | 0.01 | 7.94 | GT | 1.7819 | AG | 1.7465 | 1.4451 | 2407 | 0 |
| CD74--ROS1 | 3 | 1 | 3.00 | 0.02 | CD74^ENSG00000019582.16 | 4992 | chr5:150404678:- | ROS1^ENSG00000047936.11 | 48732 | chr6:117324414:- | INCL_NON_REF_SPLICE | YES | 13889 | 18 | 0.00 | 0.26 | AC | 1.9329 | GA | 1.8295 | 0.0307 | 2408 | 0 |
| PAX8--PPARG | 119 | 0 | 119.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 40 | 7 | 2.93 | 15.00 | GT | 1.8295 | AG | 1.9329 | 1.2112 | 1923 | 0 |
| PAX8--PPARG | 3 | 0 | 3.00 | 0.00 | PAX8^ENSG00000125618.18 | 9704 | chr2:113235404:- | PPARG^ENSG00000132170.23 | 31395 | chr3:12379695:+ | INCL_NON_REF_SPLICE | YES | 48 | 4 | 0.08 | 0.80 | CT | 1.8323 | TT | 1.9086 | 0.0305 | 1933 | 0 |
| SLC45A3--BRAF | 119 | 0 | 119.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 808 | 120.00 | 0.15 | GT | 1.5628 | AG | 1.7465 | 1.2112 | 2599 | 0 |
| EGFR--SEPTIN14 | 83 | 0 | 83.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 6 | 1 | 12.00 | 42.00 | GT | 1.8892 | AG | 1.9899 | 0.8448 | 658 | 0 |
| AC105105.1--MALT1 | 3 | 0 | 3.00 | 0.00 | AC105105.1^ENSG00000267257.1 | 2246 | chr18:58536660:+ | MALT1^ENSG00000172175.15 | 56844 | chr18:58681170:+ | INCL_NON_REF_SPLICE | YES | 405 | 738 | 0.01 | 0.01 | GT | 1.9086 | AG | 1.9899 | 0.0305 | 227 | 0 |
| MCM3AP--TMEM165 | 2 | 0 | 2.00 | 0.00 | MCM3AP^ENSG00000160294.11 | 22830 | chr21:46251529:- | TMEM165^ENSG00000134851.13 | 42616 | chr4:55417072:+ | ONLY_REF_SPLICE | YES | 256 | 298 | 0.01 | 0.01 | GT | 1.8062 | AG | 1.4716 | 0.0204 | 668 | 0 |
| PRKCB--BANP | 2 | 0 | 2.00 | 0.00 | PRKCB^ENSG00000166501.14 | 7715 | chr16:23988590:+ | BANP^ENSG00000172530.20 | 63003 | chr16:88065267:+ | ONLY_REF_SPLICE | YES | 665 | 170 | 0.00 | 0.02 | GT | 1.8892 | AG | 1.9219 | 0.0204 | 1697 | 0 |
| ELMOD2--KIAA1109 | 1 | 1 | 1.00 | 1.00 | ELMOD2^ENSG00000179387.10 | 10554 | chr4:140543586:+ | KIAA1109^ENSG00000138688.16 | 20450 | chr4:122170615:+ | ONLY_REF_SPLICE | YES | 41 | 104 | 0.07 | 0.03 | GT | 1.6729 | AG | 1.7968 | 0.0204 | 4116 | 0 |
23 rows