#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
FGFR3--TACC3	162	0	162.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	6	599	23.29	0.27	GT	1.8892	AG	1.7819	1.662	627	0
TMPRSS2--ERG	100	0	100.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	28751	chr21:38584945:-	ONLY_REF_SPLICE	YES	0	1	101.00	50.50	GT	1.6895	AG	1.9219	1.0259	1104	0
FGFR3--BAIAP2L1	65	0	65.00	0.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	BAIAP2L1^ENSG00000006453.14	16927	chr7:98362432:-	ONLY_REF_SPLICE	YES	6	12	9.43	5.08	GT	1.8892	AG	1.8062	0.6669	1171	0
LMNA--NTRK1	34	0	34.00	0.00	LMNA^ENSG00000160789.23	17733	chr1:156130773:+	NTRK1^ENSG00000198400.13	40289	chr1:156874906:+	ONLY_REF_SPLICE	YES	551	9	0.06	3.50	GT	1.7465	AG	1.5058	0.3488	947	0
CCDC6--RET	29	0	29.00	0.00	CCDC6^ENSG00000108091.11	1435	chr10:59906122:-	RET^ENSG00000165731.20	31587	chr10:43116584:+	ONLY_REF_SPLICE	YES	530	9	0.06	3.00	GT	1.8892	AG	1.8323	0.2975	2092	0
NCOA4--RET	23	0	23.00	0.00	NCOA4^ENSG00000266412.6	9075	chr10:46012883:-	RET^ENSG00000165731.20	30127	chr10:43116584:+	ONLY_REF_SPLICE	YES	385	9	0.06	2.40	GT	1.9086	AG	1.8323	0.236	5144	0
KIF5B--RET	20	0	20.00	0.00	KIF5B^ENSG00000170759.11	19977	chr10:32017143:-	RET^ENSG00000165731.20	38832	chr10:43114480:+	ONLY_REF_SPLICE	YES	275	1	0.08	10.50	GT	1.9656	AG	1.9656	0.2052	3178	0
TFG--NTRK1	20	0	20.00	0.00	TFG^ENSG00000114354.15	9135	chr3:100732672:+	NTRK1^ENSG00000198400.13	37655	chr1:156874571:+	ONLY_REF_SPLICE	YES	246	2	0.09	7.00	GT	1.9329	AG	1.6895	0.2052	883	0
SLC34A2--ROS1	17	0	17.00	0.00	SLC34A2^ENSG00000157765.13	6084	chr4:25664330:+	ROS1^ENSG00000047936.11	58025	chr6:117324415:-	ONLY_REF_SPLICE	YES	0	2	18.00	6.00	GT	1.8892	AG	1.7465	0.1744	999	0
CD74--ROS1	14	0	14.00	0.00	CD74^ENSG00000019582.16	4990	chr5:150404680:-	ROS1^ENSG00000047936.11	48731	chr6:117324415:-	ONLY_REF_SPLICE	YES	10743	3	0.00	3.75	GT	1.7819	AG	1.7465	0.1436	2407	0
ETV6--NTRK3	9	0	9.00	0.00	ETV6^ENSG00000139083.11	11237	chr12:11869969:+	NTRK3^ENSG00000140538.16	46238	chr15:87940753:-	ONLY_REF_SPLICE	YES	655	0	0.02	10.00	GT	1.7819	AG	1.9656	0.0923	1252	0
PAX8--PPARG	5	0	5.00	0.00	PAX8^ENSG00000125618.18	9714	chr2:113235394:-	PPARG^ENSG00000132170.23	31404	chr3:12379704:+	ONLY_REF_SPLICE	YES	9	5	0.60	1.00	GT	1.8295	AG	1.9329	0.0513	1923	0
TPM3--NTRK1	5	0	5.00	0.00	TPM3^ENSG00000143549.21	13389	chr1:154170400:-	NTRK1^ENSG00000198400.13	42070	chr1:156874571:+	ONLY_REF_SPLICE	YES	2598	2	0.00	2.00	GT	1.9329	AG	1.6895	0.0513	355	0
SCARB2--PML	3	0	3.00	0.00	SCARB2^ENSG00000138760.10	27999	chr4:76159644:-	PML^ENSG00000140464.20	44369	chr15:74035948:+	INCL_NON_REF_SPLICE	YES	8	889	0.44	0.00	TT	1.4566	CT	1.9656	0.0308	203	0
SLC45A3--BRAF	3	0	3.00	0.00	SLC45A3^ENSG00000158715.6	1116	chr1:205680394:-	BRAF^ENSG00000157764.14	25172	chr7:140794467:-	ONLY_REF_SPLICE	YES	0	442	4.00	0.01	GT	1.5628	AG	1.7465	0.0308	2599	0
CLN5--LRBA	2	0	2.00	0.00	CLN5^ENSG00000102805.16	6468	chr13:76996127:+	LRBA^ENSG00000198589.14	73045	chr4:150590859:-	ONLY_REF_SPLICE	YES	56	317	0.05	0.01	GT	1.8892	AG	1.8295	0.0205	653	0
LRBA--FBXW7	2	0	2.00	0.00	LRBA^ENSG00000198589.14	2301	chr4:151014427:-	FBXW7^ENSG00000109670.16	90638	chr4:152337936:-	ONLY_REF_SPLICE	YES	336	213	0.01	0.01	GT	1.8892	AG	1.8892	0.0205	1165	0
MYO1D--NF1	2	0	2.00	0.00	MYO1D^ENSG00000176658.17	24574	chr17:32711988:-	NF1^ENSG00000196712.18	76932	chr17:31258344:+	ONLY_REF_SPLICE	YES	57	161	0.05	0.02	GT	1.8256	AG	1.8892	0.0205	783	0
POMK--ERCC6L2	2	0	2.00	0.00	POMK^ENSG00000185900.11	8827	chr8:43103830:+	ERCC6L2^ENSG00000182150.18	55884	chr9:96004520:+	ONLY_REF_SPLICE	YES	138	47	0.02	0.06	GT	1.7056	AG	1.2366	0.0205	597	0
STIL--CLEC2D	2	0	2.00	0.00	STIL^ENSG00000123473.16	6502	chr1:47301561:-	CLEC2D^ENSG00000069493.15	37216	chr12:9694760:+	ONLY_REF_SPLICE	YES	74	620	0.04	0.00	GT	1.9086	AG	1.8062	0.0205	1015	0
TMEM165--GTF2F2	2	0	2.00	0.00	TMEM165^ENSG00000134851.13	6109	chr4:55411839:+	GTF2F2^ENSG00000188342.12	22847	chr13:45151687:+	ONLY_REF_SPLICE	YES	151	113	0.02	0.03	GT	1.9656	AG	1.7232	0.0205	2221	0
FBXW7--LRBA	1	0	1.00	0.00	FBXW7^ENSG00000109670.16	2152	chr4:152534941:-	LRBA^ENSG00000198589.14	88164	chr4:150350159:-	ONLY_REF_SPLICE	YES	103	137	0.02	0.01	GT	1.7465	AG	1.8892	0.0103	1592	0